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Aliases for GC10M045391 Gene

Subcategory (RNA class) for GC10M045391 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for GC10M045391 Gene

No Aliases found

No data available for External Ids for GC10M045391 Gene

Summaries for GC10M045391 Gene

GeneCards Summary for GC10M045391 Gene

GC10M045391 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10M045391 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC10M045391

Additional gene information for GC10M045391 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M045391 Gene

Genomics for GC10M045391 Gene

Regulatory Elements for GC10M045391 Gene

Enhancers for GC10M045391 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H045373 1.6 FANTOM5 ENCODE dbSUPER 0.4 +16.4 16432 4 PKNOX1 ZNF121 ZNF766 GLIS2 GATA2 ZNF143 FOS ATF7 RUNX3 SP3 ALOX5 OR13A1 AGAP10P WASHC2C ZFAND4 GC10M045391
GH10H045378 1.2 FANTOM5 ENCODE dbSUPER 0.4 +11.7 11707 1 POLR2A EED MAX RUNX3 MYC OR13A1 ALOX5 WASHC2C GC10M045391
GH10H045408 1.2 FANTOM5 ENCODE dbSUPER 0.4 -17.5 -17460 0 PKNOX1 ZNF316 NR4A1 ZNF512 MAFG NFE2 EMSY ZKSCAN1 ALOX5 LOC102724323 WASHC2C PIR47812 GC10M045391
GH10H045404 1 ENCODE dbSUPER 0.4 -12.7 -12668 0 HDAC1 ATF1 FOSL1 CTBP1 GATA2 NFE2 ETV6 RUNX3 SMARCE1 DPF2 PIR47812 GC10M045391
GH10H045405 0.9 ENCODE dbSUPER 0.4 -12.9 -12919 0 HDAC1 ATF1 TAL1 DPF2 FOSL1 HDAC2 NFE2 RUNX3 EMSY NR2C2 PIR47812 GC10M045391
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M045391 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M045391 Gene

Chromosome:
10
Start:
45,391,616 bp from pter
End:
45,391,649 bp from pter
Size:
34 bases
Orientation:
Minus strand

Genomic View for GC10M045391 Gene

Genes around GC10M045391 on UCSC Golden Path with GeneCards custom track

GC10M045391 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M045391 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M045391 Gene

ORGUL Member Location for GC10M045391 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M045391 Gene

Proteins for GC10M045391 Gene

Post-translational modifications for GC10M045391 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M045391 Gene

Domains & Families for GC10M045391 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M045391 Gene

Function for GC10M045391 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M045391 Gene

Localization for GC10M045391 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M045391 Gene

Pathways & Interactions for GC10M045391 Gene

SuperPathways for GC10M045391 Gene

No Data Available

Interacting Proteins for GC10M045391 Gene

Gene Ontology (GO) - Biological Process for GC10M045391 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M045391 Gene

Drugs & Compounds for GC10M045391 Gene

No Compound Related Data Available

Transcripts for GC10M045391 Gene

fRNAdb Secondary structures for GC10M045391 Gene

  • FR015256
  • FR142664
  • FR106054

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M045391 Gene

No ASD Table

Relevant External Links for GC10M045391 Gene

GeneLoc Exon Structure for
GC10M045391

No data available for mRNA/cDNA for GC10M045391 Gene

Expression for GC10M045391 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M045391 Gene

Orthologs for GC10M045391 Gene

No data available for Orthologs and Evolution for GC10M045391 Gene

Paralogs for GC10M045391 Gene

No data available for Paralogs for GC10M045391 Gene

Variants for GC10M045391 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M045391 Gene

Disorders for GC10M045391 Gene

No disorders were found for GC10M045391 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M045391 Gene

Publications for GC10M045391 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC10M045391 Gene

Sources for GC10M045391 Gene

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