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Aliases for GC10M029765 Gene

Subcategory (RNA class) for GC10M029765 Gene


Quality Score for this RNA gene is


Aliases for GC10M029765 Gene

No Aliases found

ORGUL Members for GC10M029765 Gene

No data available for External Ids for GC10M029765 Gene

Summaries for GC10M029765 Gene

GeneCards Summary for GC10M029765 Gene

GC10M029765 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC10M029765 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC10M029765 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M029765 Gene

Genomics for GC10M029765 Gene

Regulatory Elements for GC10M029765 Gene

Enhancers for GC10M029765 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H028875 0.9 Ensembl ENCODE 0.7 -1.3 -1283 0.7 SOX13 SP5 ZIC2 RARA TEAD3 SCRT2 CEBPA TCF7 BCL6 C10orf126 RNU6-270P GC10M029765 RNA5SP308 RPL21P93
GH10H028873 0.5 ENCODE 0.7 +0.6 643 0.8 JUND ATF3 HNF4G HNF4A C10orf126 RNU6-270P GC10M029765 RNA5SP308
GH10H028884 0.8 ENCODE 0.4 -10.0 -10000 0.2 SOX13 FOXA2 RARA GATA3 RERE FOS NR2F6 CREM TCF7L2 SOX5 C10orf126 LYZL1 GC10M029765 RNA5SP308 RPL21P93
GH10H028879 0.6 Ensembl ENCODE 0.4 -5.6 -5631 0.7 NR2F2 C10orf126 RNU6-270P GC10M029765 RNA5SP308 RPL21P93
GH10H028890 0.6 ENCODE 0.4 -16.4 -16364 1.5 TBP SMAD5 CEBPB CEBPG RAD21 FOSL1 ZNF24 ZBTB33 SPI1 C10orf126 RNU6-270P RPL21P93 RNA5SP308 GC10M029765
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M029765 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10M029765 Gene

Genomic Locations for GC10M029765 Gene
116 bases
Minus strand

Genomic View for GC10M029765 Gene

Genes around GC10M029765 on UCSC Golden Path with GeneCards custom track

GC10M029765 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M029765 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M029765 Gene

Proteins for GC10M029765 Gene

Post-translational modifications for GC10M029765 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M029765 Gene

Domains & Families for GC10M029765 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M029765 Gene

Function for GC10M029765 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M029765 Gene

Localization for GC10M029765 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M029765 Gene

Pathways & Interactions for GC10M029765 Gene

SuperPathways for GC10M029765 Gene

No Data Available

Interacting Proteins for GC10M029765 Gene

Gene Ontology (GO) - Biological Process for GC10M029765 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC10M029765 Gene

Drugs & Compounds for GC10M029765 Gene

No Compound Related Data Available

Transcripts for GC10M029765 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M029765 Gene

No ASD Table

Relevant External Links for GC10M029765 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC10M029765 Gene

Expression for GC10M029765 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M029765 Gene

Orthologs for GC10M029765 Gene

No data available for Orthologs and Evolution for GC10M029765 Gene

Paralogs for GC10M029765 Gene

No data available for Paralogs for GC10M029765 Gene

Variants for GC10M029765 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M029765 Gene

Disorders for GC10M029765 Gene

No disorders were found for GC10M029765 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M029765 Gene

Publications for GC10M029765 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

Products for GC10M029765 Gene

Sources for GC10M029765 Gene

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