Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC10M028761 Gene

Subcategory (RNA class) for GC10M028761 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC10M028761 Gene

No Aliases found

ORGUL Members for GC10M028761 Gene

No data available for External Ids for GC10M028761 Gene

Summaries for GC10M028761 Gene

GeneCards Summary for GC10M028761 Gene

GC10M028761 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC10M028761 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M028761 Gene

Genomics for GC10M028761 Gene

Regulatory Elements for GC10M028761 Gene

Enhancers for GC10M028761 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G028760 0.5 ENCODE 0.7 -0.5 -488 1.7 ZNF680 HDAC2 ZMYM3 KDM1A ENSG00000236716 GC10M028761 RNU6-270P PIRC48
GH10G028755 0.6 ENCODE 0.4 +5.7 5717 0.2 ARID1B JUND ATF3 ZNF629 MLLT1 ZMIZ1 ATF2 GC10M028761 RNU6-270P ENSG00000236716
GH10G028743 0.6 ENCODE 0.4 +17.0 17043 0.9 GATA3 IKZF1 ZMYM3 FOS REST ZNF24 ENSG00000236716 C10orf126 GC10M028761 RNU6-270P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M028761 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M028761 Gene

Chromosome:
10
Start:
28,760,701 bp from pter
End:
28,760,803 bp from pter
Size:
103 bases
Orientation:
Minus strand

Genomic View for GC10M028761 Gene

Genes around GC10M028761 on UCSC Golden Path with GeneCards custom track

GC10M028761 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M028761 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M028761 Gene

Proteins for GC10M028761 Gene

Post-translational modifications for GC10M028761 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M028761 Gene

Domains & Families for GC10M028761 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M028761 Gene

Function for GC10M028761 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M028761 Gene

Localization for GC10M028761 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC10M028761 Gene

Pathways & Interactions for GC10M028761 Gene

SuperPathways for GC10M028761 Gene

No Data Available

Interacting Proteins for GC10M028761 Gene

Gene Ontology (GO) - Biological Process for GC10M028761 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M028761 Gene

Drugs & Compounds for GC10M028761 Gene

No Compound Related Data Available

Transcripts for GC10M028761 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M028761 Gene

No ASD Table

Relevant External Links for GC10M028761 Gene

GeneLoc Exon Structure for
GC10M028761

No data available for mRNA/cDNA for GC10M028761 Gene

Expression for GC10M028761 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M028761 Gene

Orthologs for GC10M028761 Gene

No data available for Orthologs and Evolution for GC10M028761 Gene

Paralogs for GC10M028761 Gene

No data available for Paralogs for GC10M028761 Gene

Variants for GC10M028761 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M028761 Gene

Disorders for GC10M028761 Gene

No disorders were found for GC10M028761 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M028761 Gene

Publications for GC10M028761 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC10M028761 Gene

Sources for GC10M028761 Gene

Content
Loading form....