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Aliases for GC10M017482 Gene

Subcategory (RNA class) for GC10M017482 Gene

7SK RNA

Quality Score for this RNA gene is

2

Aliases for GC10M017482 Gene

No Aliases found

ORGUL Members for GC10M017482 Gene

No data available for External Ids for GC10M017482 Gene

Summaries for GC10M017482 Gene

GeneCards Summary for GC10M017482 Gene

GC10M017482 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC10M017482 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC10M017482 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M017482 Gene

Genomics for GC10M017482 Gene

Regulatory Elements for GC10M017482 Gene

Enhancers for GC10M017482 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H017508 1.3 Ensembl ENCODE 0.3 -28.7 -28710 5 HDGF PKNOX1 ARNT TCF12 GTF3C2 ZNF121 GATA2 FOS ATF7 RUNX3 ST8SIA6 HACD1 LOC105376438 GC10M017482 PRPF38AP2
GH10H017504 1.1 FANTOM5 ENCODE 0.3 -23.6 -23623 3 HDGF IRF2 RELA ZNF316 SCRT2 MAFK SCRT1 NR4A1 MAFG ZNF592 ST8SIA6 HACD1 STAM GC10M017482 PRPF38AP2
GH10H017473 0.8 ENCODE 0.4 +9.6 9613 0 HDAC1 TBP LEF1 BMI1 ZBTB40 YY1 FOSL1 ZNF766 DIDO1 POLR2A HACD1 LOC105376437 GC10M017482
GH10H017474 0.7 ENCODE 0.4 +8.9 8873 0 TBP KLF1 GTF2E2 CHAMP1 FOSL1 POLR2A GATA2 ZSCAN5C SMARCE1 L3MBTL2 HACD1 LOC105376437 GC10M017482
GH10H017526 1.2 FANTOM5 Ensembl ENCODE 0.2 -45.1 -45140 2 JUN CEBPB EP300 ATF2 GTF3C2 JUND POLR2A ATF7 TCF7L2 LOC105376438 VIM PRPF38AP2 GC10M017482
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M017482 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M017482 Gene

Chromosome:
10
Start:
17,482,399 bp from pter
End:
17,482,709 bp from pter
Size:
311 bases
Orientation:
Minus strand

Genomic View for GC10M017482 Gene

Genes around GC10M017482 on UCSC Golden Path with GeneCards custom track

GC10M017482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M017482 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M017482 Gene

Proteins for GC10M017482 Gene

Post-translational modifications for GC10M017482 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M017482 Gene

Domains & Families for GC10M017482 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M017482 Gene

Function for GC10M017482 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M017482 Gene

Localization for GC10M017482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M017482 Gene

Pathways & Interactions for GC10M017482 Gene

SuperPathways for GC10M017482 Gene

No Data Available

Interacting Proteins for GC10M017482 Gene

Gene Ontology (GO) - Biological Process for GC10M017482 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M017482 Gene

Drugs & Compounds for GC10M017482 Gene

No Compound Related Data Available

Transcripts for GC10M017482 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M017482 Gene

No ASD Table

Relevant External Links for GC10M017482 Gene

GeneLoc Exon Structure for
GC10M017482

No data available for mRNA/cDNA for GC10M017482 Gene

Expression for GC10M017482 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M017482 Gene

Orthologs for GC10M017482 Gene

No data available for Orthologs and Evolution for GC10M017482 Gene

Paralogs for GC10M017482 Gene

No data available for Paralogs for GC10M017482 Gene

Variants for GC10M017482 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M017482 Gene

Disorders for GC10M017482 Gene

No disorders were found for GC10M017482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M017482 Gene

Publications for GC10M017482 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

Products for GC10M017482 Gene

Sources for GC10M017482 Gene

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