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Aliases for GC10M006043 Gene

Subcategory (RNA class) for GC10M006043 Gene

lncRNA

Quality Score for this RNA gene is

6

Aliases for GC10M006043 Gene

No Aliases found

No data available for External Ids for GC10M006043 Gene

Summaries for GC10M006043 Gene

GeneCards Summary for GC10M006043 Gene

GC10M006043 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC10M006043 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC10M006043

Additional gene information for GC10M006043 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M006043 Gene

Genomics for GC10M006043 Gene

Regulatory Elements for GC10M006043 Gene

Enhancers for GC10M006043 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H006044 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -1.1 -1139 1 HDAC1 SIN3A EBF1 BATF RELA POLR2A EED ATF7 RUNX3 IKZF2 PFKFB3 IL15RA RBM17 IL2RA GC10M006044 GC10M006043
GH10H006049 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.7 -7733 5 HDGF PKNOX1 FOXA2 ATF1 MLX SIN3A YY1 ZNF207 ATF7 RUNX3 PFKFB3 IL2RA IL15RA RBM17 GC10M006043 GC10M006044
GH10H006033 1.5 FANTOM5 Ensembl ENCODE 0.4 +10.2 10223 0 HDAC1 PKNOX1 ATF1 TBL1XR1 ARNT ZBTB40 ZNF766 ATF7 NCOA1 ZEB2 PFKFB3 IL15RA LOC105376384 FBXO18 RBM17 ENSG00000229664 GC10M006043 GC10M006044
GH10H006036 1.2 FANTOM5 ENCODE dbSUPER 0.4 +6.4 6373 2 SMARCE1 SOX6 PYGO2 CTBP1 GATA2 ZNF512 IKZF1 HMBOX1 IL15RA PFKFB3 LOC105376384 FBXO18 IL2RA RBM17 GC10M006043 GC10M006044 ENSG00000229664
GH10H006048 0.6 FANTOM5 dbSUPER 0.7 -4.3 -4250 0 IL2RA PFKFB3 RBM17 IL15RA GC10M006044 GC10M006043
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC10M006043 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC10M006043 Gene

Chromosome:
10
Start:
6,043,783 bp from pter
End:
6,044,329 bp from pter
Size:
547 bases
Orientation:
Minus strand

Genomic View for GC10M006043 Gene

Genes around GC10M006043 on UCSC Golden Path with GeneCards custom track

GC10M006043 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M006043 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M006043 Gene

ORGUL Member Location for GC10M006043 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M006043 Gene

Proteins for GC10M006043 Gene

Post-translational modifications for GC10M006043 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M006043 Gene

Domains & Families for GC10M006043 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M006043 Gene

Function for GC10M006043 Gene

Phenotypes From GWAS Catalog for GC10M006043 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M006043 Gene

Localization for GC10M006043 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M006043 Gene

Pathways & Interactions for GC10M006043 Gene

SuperPathways for GC10M006043 Gene

No Data Available

Interacting Proteins for GC10M006043 Gene

Gene Ontology (GO) - Biological Process for GC10M006043 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M006043 Gene

Drugs & Compounds for GC10M006043 Gene

No Compound Related Data Available

Transcripts for GC10M006043 Gene

fRNAdb Secondary structures for GC10M006043 Gene

  • FR008212

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M006043 Gene

No ASD Table

Relevant External Links for GC10M006043 Gene

GeneLoc Exon Structure for
GC10M006043

No data available for mRNA/cDNA for GC10M006043 Gene

Expression for GC10M006043 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M006043 Gene

Orthologs for GC10M006043 Gene

No data available for Orthologs and Evolution for GC10M006043 Gene

Paralogs for GC10M006043 Gene

No data available for Paralogs for GC10M006043 Gene

Variants for GC10M006043 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC10M006043 Gene

Disorders for GC10M006043 Gene

No disorders were found for GC10M006043 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M006043 Gene

Publications for GC10M006043 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC10M006043 Gene

Sources for GC10M006043 Gene

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