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Aliases for GC0XP110056 Gene

Subcategory (RNA class) for GC0XP110056 Gene

miRNA

Quality Score for this RNA gene is

0

Aliases for GC0XP110056 Gene

No Aliases found

ORGUL Members for GC0XP110056 Gene

No data available for External Ids for GC0XP110056 Gene

Summaries for GC0XP110056 Gene

GeneCards Summary for GC0XP110056 Gene

GC0XP110056 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC0XP110056 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

Additional gene information for GC0XP110056 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XP110056 Gene

Genomics for GC0XP110056 Gene

GeneHancer (GH) Regulatory Elements for GC0XP110056 Gene

Promoters and enhancers for GC0XP110056 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI110001 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.2 -51.9 -51941 4.5 HDGF PKNOX1 ARNT ZNF2 POLR2B ZNF766 ZNF143 ZNF548 ZNF263 SP3 TMEM164 AMMECR1 GC0XP110056
GH0XI110036 Enhancer 0.9 ENCODE 0.4 -18.1 -18058 2.3 FOXA2 RARA RFX5 RCOR1 CREM RUNX3 MIXL1 RXRA CEBPB ZEB2 TMEM164 GC0XP110056
GH0XI110020 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 -33.1 -33072 2.8 SCRT1 GFI1B CEBPB EBF1 OSR2 ZNF148 GLIS1 PATZ1 IKZF1 SCRT2 RTL9 TMEM164 GC0XP110056
GH0XI110023 Enhancer 0.9 Ensembl ENCODE 0.3 -29.4 -29382 4.3 KLF1 KLF17 CEBPB EP300 RAD21 FOXA1 ZNF335 ZFHX2 PRDM6 POLR2A TMEM164 GC0XP110056
GH0XI110046 Enhancer 0.6 ENCODE 0.4 -9.2 -9180 0.2 SOX13 GATAD2A CTCF FOXA2 SAP130 FOXA3 FEZF1 RAD21 GATA3 CREB1 GC0XP110056 TMEM164
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC0XP110056 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC0XP110056 Gene

Genomic Locations for GC0XP110056 Gene
chrX:110,055,328-110,055,426
(GRCh38/hg38)
Size:
99 bases
Orientation:
Plus strand

Genomic View for GC0XP110056 Gene

Genes around GC0XP110056 on UCSC Golden Path with GeneCards custom track

GC0XP110056 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XP110056 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XP110056 Gene

Proteins for GC0XP110056 Gene

Post-translational modifications for GC0XP110056 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XP110056 Gene

Domains & Families for GC0XP110056 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XP110056 Gene

Function for GC0XP110056 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XP110056 Gene

Localization for GC0XP110056 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XP110056 Gene

Pathways & Interactions for GC0XP110056 Gene

SuperPathways for GC0XP110056 Gene

No Data Available

Interacting Proteins for GC0XP110056 Gene

Gene Ontology (GO) - Biological Process for GC0XP110056 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XP110056 Gene

Drugs & Compounds for GC0XP110056 Gene

No Compound Related Data Available

Transcripts for GC0XP110056 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XP110056 Gene

No ASD Table

Relevant External Links for GC0XP110056 Gene

GeneLoc Exon Structure for
GC0XP110056

No data available for mRNA/cDNA for GC0XP110056 Gene

Expression for GC0XP110056 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XP110056 Gene

Orthologs for GC0XP110056 Gene

No data available for Orthologs and Evolution for GC0XP110056 Gene

Paralogs for GC0XP110056 Gene

No data available for Paralogs for GC0XP110056 Gene

Variants for GC0XP110056 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC0XP110056 Gene

Disorders for GC0XP110056 Gene

No disorders were found for GC0XP110056 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XP110056 Gene

Publications for GC0XP110056 Gene

  1. The colorectal microRNAome. (PMID: 16505370) Cummins JM … Velculescu VE (Proceedings of the National Academy of Sciences of the United States of America 2006) 1

Products for GC0XP110056 Gene

Sources for GC0XP110056 Gene

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