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Aliases for GC0XP041293 Gene

Subcategory (RNA class) for GC0XP041293 Gene

rRNA

Quality Score for this RNA gene is

2

Aliases for GC0XP041293 Gene

No Aliases found

ORGUL Members for GC0XP041293 Gene

No data available for External Ids for GC0XP041293 Gene

Summaries for GC0XP041293 Gene

GeneCards Summary for GC0XP041293 Gene

GC0XP041293 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC0XP041293 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XP041293 Gene

Genomics for GC0XP041293 Gene

Regulatory Elements for GC0XP041293 Gene

Enhancers for GC0XP041293 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG041290 0.4 ENCODE 0.7 -1.4 -1394 2.1 FOXA1 EZH2 GC0XP041293 LOC105373184
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC0XP041293 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC0XP041293 Gene

Chromosome:
X
Start:
41,292,797 bp from pter
End:
41,292,916 bp from pter
Size:
120 bases
Orientation:
Plus strand

Genomic View for GC0XP041293 Gene

Genes around GC0XP041293 on UCSC Golden Path with GeneCards custom track

GC0XP041293 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XP041293 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XP041293 Gene

Proteins for GC0XP041293 Gene

Post-translational modifications for GC0XP041293 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XP041293 Gene

Domains & Families for GC0XP041293 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XP041293 Gene

Function for GC0XP041293 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XP041293 Gene

Localization for GC0XP041293 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC0XP041293 Gene

Pathways & Interactions for GC0XP041293 Gene

SuperPathways for GC0XP041293 Gene

No Data Available

Interacting Proteins for GC0XP041293 Gene

Gene Ontology (GO) - Biological Process for GC0XP041293 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XP041293 Gene

Drugs & Compounds for GC0XP041293 Gene

No Compound Related Data Available

Transcripts for GC0XP041293 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XP041293 Gene

No ASD Table

Relevant External Links for GC0XP041293 Gene

GeneLoc Exon Structure for
GC0XP041293

No data available for mRNA/cDNA for GC0XP041293 Gene

Expression for GC0XP041293 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XP041293 Gene

Orthologs for GC0XP041293 Gene

No data available for Orthologs and Evolution for GC0XP041293 Gene

Paralogs for GC0XP041293 Gene

No data available for Paralogs for GC0XP041293 Gene

Variants for GC0XP041293 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC0XP041293 Gene

Disorders for GC0XP041293 Gene

No disorders were found for GC0XP041293 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XP041293 Gene

Publications for GC0XP041293 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M. … Barciszewski J. (Nucleic Acids Res. 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov M.M. … Noller H.F. (Science 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles M.A. … Klug A. (J. Mol. Biol. 2000) 1

Products for GC0XP041293 Gene

Sources for GC0XP041293 Gene

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