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Aliases for GC0XM071966 Gene

Subcategory (RNA class) for GC0XM071966 Gene


Quality Score for this RNA gene is


Aliases for GC0XM071966 Gene

No Aliases found

ORGUL Members for GC0XM071966 Gene

No data available for External Ids for GC0XM071966 Gene

Summaries for GC0XM071966 Gene

GeneCards Summary for GC0XM071966 Gene

GC0XM071966 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC0XM071966 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XM071966 Gene

Genomics for GC0XM071966 Gene

Regulatory Elements for GC0XM071966 Gene

Enhancers for GC0XM071966 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG071956 0.8 ENCODE 0.4 +8.0 7979 2.6 CTCF ESRRA PKNOX1 TEAD4 CEBPG RBBP5 RAD21 SMC3 PRDM10 DEK NHSL2 GC0XM071966 RNU6-1078P PIR46915
GH0XG072003 1 Ensembl ENCODE 0.3 -38.2 -38179 1.7 BCOR ELF3 CTCF SAP130 TEAD4 ZMYM3 ZIC2 RAD21 ZFHX2 FOS GC0XM071966 RNU6-1078P RPS26P11
GH0XG071996 0.8 ENCODE 0.3 -31.0 -30984 1.4 PKNOX1 FOXA2 ZFP64 SIN3A RAD21 ZNF48 YY1 TCF12 GATA2 CEBPA NHSL2 RTL5 GC0XM071966 RNU6-1078P RPS26P11
GH0XG072001 0.8 ENCODE 0.3 -35.6 -35552 0.2 ZFP64 ZNF140 ZNF101 ZNF697 ZNF766 GLI2 ZNF354C ZNF433 ZNF202 ZNF680 RTL5 NHSL2 RNU6-1078P GC0XM071966 RPS26P11
GH0XG072028 1.2 Ensembl ENCODE 0.2 -63.8 -63792 2.7 TBP PKNOX1 INSM2 SIN3A RFX5 YY1 GATA2 RCOR1 FOS DEK RTL5 NHSL2 PIN4 RPS26P11 GC0XM071966 RNU6-1078P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC0XM071966 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC0XM071966 Gene

71,965,971 bp from pter
71,966,074 bp from pter
104 bases
Minus strand

Genomic View for GC0XM071966 Gene

Genes around GC0XM071966 on UCSC Golden Path with GeneCards custom track

GC0XM071966 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XM071966 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XM071966 Gene

Proteins for GC0XM071966 Gene

Post-translational modifications for GC0XM071966 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XM071966 Gene

Domains & Families for GC0XM071966 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XM071966 Gene

Function for GC0XM071966 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XM071966 Gene

Localization for GC0XM071966 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC0XM071966 Gene

Pathways & Interactions for GC0XM071966 Gene

SuperPathways for GC0XM071966 Gene

No Data Available

Interacting Proteins for GC0XM071966 Gene

Gene Ontology (GO) - Biological Process for GC0XM071966 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC0XM071966 Gene

Drugs & Compounds for GC0XM071966 Gene

No Compound Related Data Available

Transcripts for GC0XM071966 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XM071966 Gene

No ASD Table

Relevant External Links for GC0XM071966 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC0XM071966 Gene

Expression for GC0XM071966 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XM071966 Gene

Orthologs for GC0XM071966 Gene

No data available for Orthologs and Evolution for GC0XM071966 Gene

Paralogs for GC0XM071966 Gene

No data available for Paralogs for GC0XM071966 Gene

Variants for GC0XM071966 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC0XM071966 Gene

Disorders for GC0XM071966 Gene

No disorders were found for GC0XM071966 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XM071966 Gene

Publications for GC0XM071966 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC0XM071966 Gene

Sources for GC0XM071966 Gene

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