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Aliases for GC0XM017045 Gene

Subcategory (RNA class) for GC0XM017045 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for GC0XM017045 Gene

No Aliases found

ORGUL Members for GC0XM017045 Gene

No data available for External Ids for GC0XM017045 Gene

Summaries for GC0XM017045 Gene

GeneCards Summary for GC0XM017045 Gene

GC0XM017045 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC0XM017045 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

Additional gene information for GC0XM017045 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XM017045 Gene

Genomics for GC0XM017045 Gene

Regulatory Elements for GC0XM017045 Gene

Enhancers for GC0XM017045 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH017031 0.8 Ensembl ENCODE 0.4 +12.3 12281 2 SCRT1 JUND POLR2A SCRT2 PRDM1 ENSG00000201467 GC0XM017045 GC0XM016988
GH0XH017024 0.6 Ensembl ENCODE 0.4 +19.4 19384 0 EED REPS2 GC0XM017045 ENSG00000201467 GC0XM016988
GH0XH017037 0.5 ENCODE 0.4 +5.9 5897 1 ZNF585B POLR2A IKZF1 SPI1 EGR2 TXLNG RBBP7 REPS2 GC0XM017045 ENSG00000201467 GC0XM016988
GH0XH017020 0.4 ENCODE 0.3 +23.5 23518 1 JUNB RBBP7 GC0XM017045 ENSG00000201467 GC0XM016988
GH0XH016992 0.4 ENCODE 0.2 +51.4 51354 1 MAFK GC0XM016988 ENSG00000201467 GC0XM017045
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC0XM017045 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC0XM017045 Gene

Chromosome:
X
Start:
17,044,379 bp from pter
End:
17,044,511 bp from pter
Size:
133 bases
Orientation:
Minus strand

Genomic View for GC0XM017045 Gene

Genes around GC0XM017045 on UCSC Golden Path with GeneCards custom track

GC0XM017045 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XM017045 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XM017045 Gene

Proteins for GC0XM017045 Gene

Post-translational modifications for GC0XM017045 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XM017045 Gene

Domains & Families for GC0XM017045 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XM017045 Gene

Function for GC0XM017045 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XM017045 Gene

Localization for GC0XM017045 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XM017045 Gene

Pathways & Interactions for GC0XM017045 Gene

SuperPathways for GC0XM017045 Gene

No Data Available

Interacting Proteins for GC0XM017045 Gene

Gene Ontology (GO) - Biological Process for GC0XM017045 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XM017045 Gene

Drugs & Compounds for GC0XM017045 Gene

No Compound Related Data Available

Transcripts for GC0XM017045 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XM017045 Gene

No ASD Table

Relevant External Links for GC0XM017045 Gene

GeneLoc Exon Structure for
GC0XM017045

No data available for mRNA/cDNA for GC0XM017045 Gene

Expression for GC0XM017045 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XM017045 Gene

Orthologs for GC0XM017045 Gene

No data available for Orthologs and Evolution for GC0XM017045 Gene

Paralogs for GC0XM017045 Gene

No data available for Paralogs for GC0XM017045 Gene

Variants for GC0XM017045 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC0XM017045 Gene

Disorders for GC0XM017045 Gene

No disorders were found for GC0XM017045 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XM017045 Gene

Publications for GC0XM017045 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 1
  2. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P … Cavaillé J (Nucleic acids research 2003) 1

Products for GC0XM017045 Gene

Sources for GC0XM017045 Gene

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