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Aliases for GC0XM009875 Gene

Subcategory (RNA class) for GC0XM009875 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC0XM009875 Gene

No Aliases found

ORGUL Members for GC0XM009875 Gene

No data available for External Ids for GC0XM009875 Gene

Summaries for GC0XM009875 Gene

GeneCards Summary for GC0XM009875 Gene

GC0XM009875 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC0XM009875 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC0XM009875 Gene

Genomics for GC0XM009875 Gene

Regulatory Elements for GC0XM009875 Gene

Enhancers for GC0XM009875 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH009865 0.9 Ensembl ENCODE 0.4 +7.8 7804 2 JUN USF2 CEBPB EP300 RELA JUND MAFF STAT3 RCOR1 FOS SHROOM2 HMGN1P33 ENSG00000206844 GC0XM009875
GH0XH009881 0.9 Ensembl ENCODE 0.4 -8.7 -8704 2 CTCF ATF1 TAL1 JUN MAX ATF2 FOSL1 IKZF1 ATF7 CREM CLCN4 GC0XM009875 ENSG00000206844 CLDN34
GH0XH009897 0.9 Ensembl ENCODE 0.3 -24.5 -24512 4 NR2F1 DPF2 BATF BCL11A IKZF1 FOS MLLT1 ATF7 RUNX3 IKZF2 ENSG00000206844 GC0XM009875 CLDN34
GH0XH009906 0.8 Ensembl ENCODE 0.3 -33.6 -33599 3 JUND CEBPA HLF CEBPB CEBPG FOS ZBTB40 SHROOM2 GC0XM009875 ENSG00000206844 CLDN34
GH0XH009885 0.6 ENCODE 0.4 -10.8 -10780 0 SMARCA5 CTCF TRIM22 REST RAD21 ZNF143 SMC3 MAFK CLCN4 ENSG00000206844 GC0XM009875 CLDN34
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC0XM009875 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC0XM009875 Gene

Chromosome:
X
Start:
9,874,602 bp from pter
End:
9,874,701 bp from pter
Size:
100 bases
Orientation:
Minus strand

Genomic View for GC0XM009875 Gene

Genes around GC0XM009875 on UCSC Golden Path with GeneCards custom track

GC0XM009875 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XM009875 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XM009875 Gene

Proteins for GC0XM009875 Gene

Post-translational modifications for GC0XM009875 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XM009875 Gene

Domains & Families for GC0XM009875 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XM009875 Gene

Function for GC0XM009875 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XM009875 Gene

Localization for GC0XM009875 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XM009875 Gene

Pathways & Interactions for GC0XM009875 Gene

SuperPathways for GC0XM009875 Gene

No Data Available

Interacting Proteins for GC0XM009875 Gene

Gene Ontology (GO) - Biological Process for GC0XM009875 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XM009875 Gene

Drugs & Compounds for GC0XM009875 Gene

No Compound Related Data Available

Transcripts for GC0XM009875 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XM009875 Gene

No ASD Table

Relevant External Links for GC0XM009875 Gene

GeneLoc Exon Structure for
GC0XM009875

No data available for mRNA/cDNA for GC0XM009875 Gene

Expression for GC0XM009875 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XM009875 Gene

Orthologs for GC0XM009875 Gene

No data available for Orthologs and Evolution for GC0XM009875 Gene

Paralogs for GC0XM009875 Gene

No data available for Paralogs for GC0XM009875 Gene

Variants for GC0XM009875 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC0XM009875 Gene

Disorders for GC0XM009875 Gene

No disorders were found for GC0XM009875 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XM009875 Gene

Publications for GC0XM009875 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC0XM009875 Gene

Sources for GC0XM009875 Gene

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