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GC09P132358 Gene(RNA Gene)

 

GCID:
GC09P132358
GIFtS:
4
Genes Participants
UDN Logo

Aliases for GC09P132358 Gene

Subcategory (RNA class) for GC09P132358 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC09P132358 Gene

No Aliases found

ORGUL Members for GC09P132358 Gene

No data available for External Ids for GC09P132358 Gene

Summaries for GC09P132358 Gene

GeneCards Summary for GC09P132358 Gene

GC09P132358 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC09P132358 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC09P132358 Gene

Genomics for GC09P132358 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for GC09P132358 Gene

Promoters and enhancers for GC09P132358 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH09I132356 Enhancer 0.4 ENCODE 550.8 -2.0 -1954 0.2 KLF9 ZBTB33 GC09P132358 SETX GC09M132284
GH09I132372 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.6 14596 2.3 ZBTB40 BATF IRF4 ZNF121 ATF7 ETV6 IKZF2 RUNX3 SMARCC1 JUNB SETX GC09P132358 PIR62838
GH09I132381 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +24.7 24748 3.9 CTCF PKNOX1 EBF1 BATF YY1 RELA POLR2A NFATC1 ZNF143 ATF7 SETX TTF1 RNU5D-2P PIR62838 GC09P132358
GH09I132366 Enhancer 0.5 Ensembl dbSUPER 0.4 +8.2 8222 0.5 CEBPB GC09P132358 PIR62838
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09P132358 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09P132358 Gene

Genomic Locations for GC09P132358 Gene
chr9:132,358,543-132,358,799
(GRCh38/hg38)
Size:
257 bases
Orientation:
Plus strand

Genomic View for GC09P132358 Gene

Genes around GC09P132358 on UCSC Golden Path with GeneCards custom track

GC09P132358 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P132358 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P132358 Gene

Proteins for GC09P132358 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GC09P132358 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P132358 Gene

Domains & Families for GC09P132358 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P132358 Gene

Function for GC09P132358 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for GC09P132358 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P132358 Gene

Localization for GC09P132358 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P132358 Gene

Pathways & Interactions for GC09P132358 Gene

SuperPathways for GC09P132358 Gene

PathCards logo More details on SuperPathways for GC09P132358
No Data Available

Interacting Proteins for GC09P132358 Gene

Gene Ontology (GO) - Biological Process for GC09P132358 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P132358 Gene

Drugs & Compounds for GC09P132358 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GC09P132358 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P132358 Gene

No ASD Table

Relevant External Links for GC09P132358 Gene

GeneLoc Exon Structure for
GC09P132358

No data available for mRNA/cDNA for GC09P132358 Gene

Expression for GC09P132358 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P132358 Gene

Orthologs for GC09P132358 Gene

No data available for Orthologs and Evolution for GC09P132358 Gene

Paralogs for GC09P132358 Gene

No data available for Paralogs for GC09P132358 Gene

Variants for GC09P132358 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09P132358 Gene

Disorders for GC09P132358 Gene

No disorders were found for GC09P132358 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P132358 Gene

Publications for GC09P132358 Gene

No publications were found for GC09P132358 Gene.

Products for GC09P132358 Gene

Sources for GC09P132358 Gene

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