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Aliases for GC09P130986 Gene

Subcategory (RNA class) for GC09P130986 Gene


Quality Score for this RNA gene is


Aliases for GC09P130986 Gene

No Aliases found

ORGUL Members for GC09P130986 Gene

No data available for External Ids for GC09P130986 Gene

Summaries for GC09P130986 Gene

GeneCards Summary for GC09P130986 Gene

GC09P130986 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09P130986 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09P130986

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P130986 Gene

Genomics for GC09P130986 Gene

Regulatory Elements for GC09P130986 Gene

Enhancers for GC09P130986 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G130994 0.9 ENCODE 0.4 +7.7 7666 0.2 ATF1 PKNOX1 ARNT TCF12 ZNF766 GATA2 ELK1 ZNF143 FOS NCOA1 GC09P130986 LAMC3
GH09G130995 0.9 ENCODE 0.4 +8.6 8603 1.5 ATF1 PKNOX1 ZSCAN4 GLI4 YBX1 RAD21 RFX5 GLIS2 ZNF766 GATA2 NCS1 GC09P130986 LAMC3
GH09G130998 0.9 ENCODE 0.4 +11.7 11656 0.2 NFIB ZNF76 KLF17 SIN3A ZNF2 ZNF48 RAD21 GLIS2 ZNF143 ZNF391 GC09P130986 LAMC3
GH09G130961 1.1 Ensembl ENCODE 0.3 -24.2 -24158 1.7 GTF2F1 MXI1 JUN SIN3A MAX RFX5 ZKSCAN1 ZFHX2 ZNF366 ZNF143 FIBCD1 LOC105376297 QRFP NUP214 GC09P130986
GH09G130946 1.1 Ensembl ENCODE 0.3 -39.5 -39536 1.4 HDGF PTBP1 PKNOX1 NFXL1 RAD21 ZNF143 ZNF207 FOS RELB EGR2 FIBCD1 GC09P130986
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P130986 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P130986 Gene

130,986,843 bp from pter
130,987,070 bp from pter
228 bases
Plus strand

Genomic View for GC09P130986 Gene

Genes around GC09P130986 on UCSC Golden Path with GeneCards custom track

GC09P130986 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P130986 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P130986 Gene

ORGUL Member Location for GC09P130986 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P130986 Gene

Proteins for GC09P130986 Gene

Post-translational modifications for GC09P130986 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P130986 Gene

Domains & Families for GC09P130986 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P130986 Gene

Function for GC09P130986 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P130986 Gene

Localization for GC09P130986 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC09P130986 Gene

Pathways & Interactions for GC09P130986 Gene

SuperPathways for GC09P130986 Gene

No Data Available

Interacting Proteins for GC09P130986 Gene

Gene Ontology (GO) - Biological Process for GC09P130986 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09P130986 Gene

Drugs & Compounds for GC09P130986 Gene

No Compound Related Data Available

Transcripts for GC09P130986 Gene

fRNAdb Secondary structures for GC09P130986 Gene

  • FR361982
  • FR079179

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P130986 Gene

No ASD Table

Relevant External Links for GC09P130986 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09P130986 Gene

Expression for GC09P130986 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P130986 Gene

Orthologs for GC09P130986 Gene

No data available for Orthologs and Evolution for GC09P130986 Gene

Paralogs for GC09P130986 Gene

No data available for Paralogs for GC09P130986 Gene

Variants for GC09P130986 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P130986 Gene

Disorders for GC09P130986 Gene

No disorders were found for GC09P130986 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P130986 Gene

Publications for GC09P130986 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC09P130986 Gene

Sources for GC09P130986 Gene

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