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Aliases for GC09P112170 Gene

Subcategory (RNA class) for GC09P112170 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC09P112170 Gene

No Aliases found

ORGUL Members for GC09P112170 Gene

No data available for External Ids for GC09P112170 Gene

Summaries for GC09P112170 Gene

GeneCards Summary for GC09P112170 Gene

GC09P112170 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC09P112170 Gene

Genomics for GC09P112170 Gene

Regulatory Elements for GC09P112170 Gene

Enhancers for GC09P112170 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G112165 1.2 Ensembl ENCODE dbSUPER 0.7 -2.9 -2900 1.4 CTCF RFX1 MTA2 ZFP64 CEBPB CEBPG REST NR3C1 RAD21 ZNF664 SUSD1 ENSG00000259953 GC09P112170 RNU6-855P
GH09G112162 1.1 Ensembl ENCODE dbSUPER 0.4 -6.1 -6121 1.8 FOXA2 ZMYM3 CHD7 HNF1A GATA3 POLR2A POU5F1 NR2F6 EZH2 SUSD1 GC09P112170 RNU6-855P
GH09G112144 1.3 ENCODE dbSUPER 0.3 -23.3 -23260 3.0 PKNOX1 FOXA2 ZBTB7B ZNF121 ELK1 ZNF207 FOS REST SREBF1 ZNF579 RPL29P20 SUSD1 RNU6-855P GC09P112170
GH09G112140 0.7 ENCODE 0.3 -28.4 -28370 0.7 TCF12 RELB IKZF2 CREM RFX1 MTA2 NR2F1 JUNB TRIM22 TBX21 SUSD1 RPL29P20 RNU6-855P GC09P112170
GH09G112154 0.2 dbSUPER 0.4 -14.7 -14678 0.9 SUSD1 GC09P112170 RNU6-855P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P112170 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P112170 Gene

Chromosome:
9
Start:
112,169,285 bp from pter
End:
112,169,395 bp from pter
Size:
111 bases
Orientation:
Plus strand

Genomic View for GC09P112170 Gene

Genes around GC09P112170 on UCSC Golden Path with GeneCards custom track

GC09P112170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P112170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P112170 Gene

Proteins for GC09P112170 Gene

Post-translational modifications for GC09P112170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P112170 Gene

Domains & Families for GC09P112170 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P112170 Gene

Function for GC09P112170 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P112170 Gene

Localization for GC09P112170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC09P112170 Gene

Pathways & Interactions for GC09P112170 Gene

SuperPathways for GC09P112170 Gene

No Data Available

Interacting Proteins for GC09P112170 Gene

Gene Ontology (GO) - Biological Process for GC09P112170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P112170 Gene

Drugs & Compounds for GC09P112170 Gene

No Compound Related Data Available

Transcripts for GC09P112170 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P112170 Gene

No ASD Table

Relevant External Links for GC09P112170 Gene

GeneLoc Exon Structure for
GC09P112170

No data available for mRNA/cDNA for GC09P112170 Gene

Expression for GC09P112170 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P112170 Gene

Orthologs for GC09P112170 Gene

No data available for Orthologs and Evolution for GC09P112170 Gene

Paralogs for GC09P112170 Gene

No data available for Paralogs for GC09P112170 Gene

Variants for GC09P112170 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P112170 Gene

Disorders for GC09P112170 Gene

No disorders were found for GC09P112170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P112170 Gene

Publications for GC09P112170 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC09P112170 Gene

Sources for GC09P112170 Gene

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