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Aliases for GC09P084671 Gene

Subcategory (RNA class) for GC09P084671 Gene

IRES

Quality Score for this RNA gene is

2

Aliases for GC09P084671 Gene

No Aliases found

ORGUL Members for GC09P084671 Gene

No data available for External Ids for GC09P084671 Gene

Summaries for GC09P084671 Gene

GeneCards Summary for GC09P084671 Gene

GC09P084671 is an RNA Gene, and is affiliated with the IRES RNA class.

fRNAdb sequence ontologies for GC09P084671 Gene

  • internal_ribosome_entry_site: Sequence element that recruits a ribosomal subunit to internal mRNA for translation initiation.

Additional gene information for GC09P084671 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P084671 Gene

Genomics for GC09P084671 Gene

Regulatory Elements for GC09P084671 Gene

Enhancers for GC09P084671 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H084667 1.1 ENCODE dbSUPER 0.7 -0.2 -218 4 ZSCAN4 ZNF76 ZNF2 RAD21 GLIS2 ELK1 ZNF366 ZNF143 RCOR1 EGR2 NTRK2 GC09P084671
GH09H084712 1.2 FANTOM5 ENCODE dbSUPER 0.3 +41.7 41716 0 ZNF687 RFX1 NFIB EBF1 ZNF217 IKZF1 RCOR1 FOS IKZF2 NTRK2 GC09P084671 GC09P085030
GH09H084709 1.1 ENCODE dbSUPER 0.3 +39.5 39506 0 HDGF PKNOX1 BACH1 SIN3A BMI1 POLR2A EED ATF7 ZSCAN29 RUNX3 GC09P084671 GC09P085030
GH09H084701 0.9 ENCODE dbSUPER 0.3 +31.9 31908 1 ZNF687 TBL1XR1 NR2F1 BACH1 EBF1 RELA IKZF1 SMC3 NBN RUNX3 GC09P084671 GC09P085030
GH09H084697 0.9 ENCODE dbSUPER 0.3 +27.3 27326 0 SMARCA5 CTCF ZNF654 RB1 MAX TRIM22 RAD21 CTBP1 ZNF143 SMC3 GC09P084671 GC09P085030
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P084671 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P084671 Gene

Chromosome:
9
Start:
84,670,395 bp from pter
End:
84,670,748 bp from pter
Size:
354 bases
Orientation:
Plus strand

Genomic View for GC09P084671 Gene

Genes around GC09P084671 on UCSC Golden Path with GeneCards custom track

GC09P084671 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P084671 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P084671 Gene

Proteins for GC09P084671 Gene

Post-translational modifications for GC09P084671 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P084671 Gene

Domains & Families for GC09P084671 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P084671 Gene

Function for GC09P084671 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P084671 Gene

Localization for GC09P084671 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P084671 Gene

Pathways & Interactions for GC09P084671 Gene

SuperPathways for GC09P084671 Gene

No Data Available

Interacting Proteins for GC09P084671 Gene

Gene Ontology (GO) - Biological Process for GC09P084671 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P084671 Gene

Drugs & Compounds for GC09P084671 Gene

No Compound Related Data Available

Transcripts for GC09P084671 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P084671 Gene

No ASD Table

Relevant External Links for GC09P084671 Gene

GeneLoc Exon Structure for
GC09P084671

No data available for mRNA/cDNA for GC09P084671 Gene

Expression for GC09P084671 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P084671 Gene

Orthologs for GC09P084671 Gene

No data available for Orthologs and Evolution for GC09P084671 Gene

Paralogs for GC09P084671 Gene

No data available for Paralogs for GC09P084671 Gene

Variants for GC09P084671 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P084671 Gene

Disorders for GC09P084671 Gene

No disorders were found for GC09P084671 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P084671 Gene

Publications for GC09P084671 Gene

  1. Internal initiation of translation of the TrkB mRNA is mediated by multiple regions within the 5' leader. (PMID: 15908588) Dobson T … Krushel L (Nucleic acids research 2005) 1

Products for GC09P084671 Gene

Sources for GC09P084671 Gene

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