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Aliases for GC09P034046 Gene

Subcategory (RNA class) for GC09P034046 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC09P034046 Gene

No Aliases found

ORGUL Members for GC09P034046 Gene

No data available for External Ids for GC09P034046 Gene

Summaries for GC09P034046 Gene

GeneCards Summary for GC09P034046 Gene

GC09P034046 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC09P034046 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P034046 Gene

Genomics for GC09P034046 Gene

Regulatory Elements for GC09P034046 Gene

Enhancers for GC09P034046 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G033867 1.4 Ensembl ENCODE dbSUPER 0.7 0.0 -38 1.8 ZFP64 ZNF354C ZNF202 ZNF654 ZNF680 ZBTB11 CEBPB ZNF426 REST ZNF623 SMU1 ASS1P12 TCEA1P4 ENSG00000228352 FAM205A ENSG00000230074 UBE2R2 DCAF12 GC09P034046 ENSG00000200834
GH09G033852 1.1 Ensembl ENCODE dbSUPER 0.4 -16.2 -16237 0.6 HDGF CTCF STAT1 ZNF654 REST RAD21 GATA3 SMC3 HNF4A UBE2R2 SNORD121B UBAP2 SNORD121A DCAF12 GC09P034046 ENSG00000200834
GH09G033850 0.9 Ensembl dbSUPER 0.4 -17.9 -17938 1.2 FOXA2 RFX1 SAP130 ZNF585B SCRT2 REST ZBTB17 FOXA1 UBE2R2 SNORD121A GC09P034046 ENSG00000200834
GH09G033835 1.2 Ensembl ENCODE dbSUPER 0.3 -32.3 -32256 2.2 ZNF211 MTA2 ZBED1 MAX JUNB CEBPB CEBPG EP300 EED CEBPA SNORD121B UBAP2 SNORD121A UBE2R2 NUDT2 KIF24 C9orf24 ENSG00000200834 GC09P034046
GH09G033858 0.8 Ensembl dbSUPER 0.4 -9.9 -9938 0.4 GTF3C2 ZNF121 JUND RFX1 ZNF580 FOS ENSG00000228352 ASS1P12 TCEA1P4 UBE2R2 SMU1 SNORD121A GC09P034046 ENSG00000200834
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P034046 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P034046 Gene

Chromosome:
9
Start:
33,868,538 bp from pter
End:
33,868,665 bp from pter
Size:
128 bases
Orientation:
Plus strand

Genomic View for GC09P034046 Gene

Genes around GC09P034046 on UCSC Golden Path with GeneCards custom track

GC09P034046 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P034046 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P034046 Gene

Proteins for GC09P034046 Gene

Post-translational modifications for GC09P034046 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P034046 Gene

Domains & Families for GC09P034046 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P034046 Gene

Function for GC09P034046 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P034046 Gene

Localization for GC09P034046 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC09P034046 Gene

Pathways & Interactions for GC09P034046 Gene

SuperPathways for GC09P034046 Gene

No Data Available

Interacting Proteins for GC09P034046 Gene

Gene Ontology (GO) - Biological Process for GC09P034046 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P034046 Gene

Drugs & Compounds for GC09P034046 Gene

No Compound Related Data Available

Transcripts for GC09P034046 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P034046 Gene

No ASD Table

Relevant External Links for GC09P034046 Gene

GeneLoc Exon Structure for
GC09P034046

No data available for mRNA/cDNA for GC09P034046 Gene

Expression for GC09P034046 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P034046 Gene

Orthologs for GC09P034046 Gene

No data available for Orthologs and Evolution for GC09P034046 Gene

Paralogs for GC09P034046 Gene

No data available for Paralogs for GC09P034046 Gene

Variants for GC09P034046 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P034046 Gene

Disorders for GC09P034046 Gene

No disorders were found for GC09P034046 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P034046 Gene

Publications for GC09P034046 Gene

  1. Evolutionary conservation of minor U12-type spliceosome between plants and humans. (PMID: 15987817) Lorkovic Z.J. … Barta A. (RNA 2005) 1
  2. A revised model for U4atac/U6atac snRNA base pairing. (PMID: 11911359) Padgett R.A. … Shukla G.C. (RNA 2002) 1
  3. Domains of human U4atac snRNA required for U12-dependent splicing in vivo. (PMID: 12409455) Shukla G.C. … Padgett R.A. (Nucleic Acids Res. 2002) 1

Products for GC09P034046 Gene

Sources for GC09P034046 Gene

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