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Aliases for GC09P004695 Gene

Subcategory (RNA class) for GC09P004695 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC09P004695 Gene

No Aliases found

ORGUL Members for GC09P004695 Gene

No data available for External Ids for GC09P004695 Gene

Summaries for GC09P004695 Gene

GeneCards Summary for GC09P004695 Gene

GC09P004695 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC09P004695 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC09P004695

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P004695 Gene

Genomics for GC09P004695 Gene

Regulatory Elements for GC09P004695 Gene

Enhancers for GC09P004695 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G004700 1 ENCODE 0.7 +4.2 4198 0.2 FOXA2 PKNOX1 MLX ARID4B DMAP1 ZNF48 YY1 SP5 MXD4 MIER2 AK3 GC09P004695
GH09G004691 0.5 ENCODE 0.7 -4.0 -4003 0.2 NFE2 MAFK NFE2L2 SPATA6L PLPP6 GC09P004695 CDC37L1
GH09G004738 1.6 Ensembl ENCODE dbSUPER 0.2 +45.4 45426 5.1 HDGF PKNOX1 FOXA2 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 AK3 RIC1 CDC37L1 JAK2 PLPP6 MTND5P14 GC09P004695
GH09G004713 0.6 ENCODE 0.4 +18.0 17978 0.2 MXI1 ZFHX2 ZEB2 PAX8 ZNF18 EGR2 AK3 GC09P004695
GH09G004715 0.3 FANTOM5 0.4 +19.3 19316 0.2 AK3 CDC37L1 PLPP6 GC09P004695
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P004695 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P004695 Gene

Chromosome:
9
Start:
4,695,998 bp from pter
End:
4,696,034 bp from pter
Size:
37 bases
Orientation:
Plus strand

Genomic View for GC09P004695 Gene

Genes around GC09P004695 on UCSC Golden Path with GeneCards custom track

GC09P004695 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P004695 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P004695 Gene

ORGUL Member Location for GC09P004695 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P004695 Gene

Proteins for GC09P004695 Gene

Post-translational modifications for GC09P004695 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P004695 Gene

Domains & Families for GC09P004695 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P004695 Gene

Function for GC09P004695 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P004695 Gene

Localization for GC09P004695 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC09P004695 Gene

Pathways & Interactions for GC09P004695 Gene

SuperPathways for GC09P004695 Gene

No Data Available

Interacting Proteins for GC09P004695 Gene

Gene Ontology (GO) - Biological Process for GC09P004695 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P004695 Gene

Drugs & Compounds for GC09P004695 Gene

No Compound Related Data Available

Transcripts for GC09P004695 Gene

fRNAdb Secondary structures for GC09P004695 Gene

  • FR398335
  • FR052969
  • FR050780

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P004695 Gene

No ASD Table

Relevant External Links for GC09P004695 Gene

GeneLoc Exon Structure for
GC09P004695

No data available for mRNA/cDNA for GC09P004695 Gene

Expression for GC09P004695 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P004695 Gene

Orthologs for GC09P004695 Gene

No data available for Orthologs and Evolution for GC09P004695 Gene

Paralogs for GC09P004695 Gene

No data available for Paralogs for GC09P004695 Gene

Variants for GC09P004695 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P004695 Gene

Disorders for GC09P004695 Gene

No disorders were found for GC09P004695 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P004695 Gene

Publications for GC09P004695 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC09P004695 Gene

Sources for GC09P004695 Gene

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