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Aliases for GC09P002100 Gene

Subcategory (RNA class) for GC09P002100 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC09P002100 Gene

No Aliases found

No data available for External Ids for GC09P002100 Gene

Summaries for GC09P002100 Gene

GeneCards Summary for GC09P002100 Gene

GC09P002100 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC09P002100 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC09P002100

Additional gene information for GC09P002100 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P002100 Gene

Genomics for GC09P002100 Gene

Regulatory Elements for GC09P002100 Gene

Enhancers for GC09P002100 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H002155 2 ENCODE dbSUPER 0.2 +57.9 57851 5 MXI1 MAX SIN3A EBF1 CEBPG POLR2A PRDM10 ETV6 RUNX3 IKZF2 SMARCA2 RNU2-25P GC09M002162 GC09P002102 GC09P002101 GC09P002100
GH09H002124 0.7 Ensembl ENCODE 0.3 +25.7 25672 2 MLLT1 PRDM1 SMARCA2 RNU2-25P GC09P002100 GC09P002101 GC09P002102 GC09M002162
GH09H002107 0.5 ENCODE 0.4 +8.5 8468 2 ZNF316 MAFG REST EMSY MAFK SMARCA2 ENSG00000236199 GC09P002100 GC09P002101 GC09P002102 RNU2-25P GC09M002162
GH09H002116 0.4 ENCODE 0.4 +15.6 15588 0 CTCF RAD21 GC09P002100 GC09P002101 GC09P002102 RNU2-25P GC09M002162
GH09H002146 0.5 ENCODE 0.2 +46.2 46188 0 CTCF RFX1 RFX3 BMI1 GC09M002162 RNU2-25P GC09P002100 GC09P002101 GC09P002102
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P002100 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P002100 Gene

Chromosome:
9
Start:
2,100,708 bp from pter
End:
2,101,978 bp from pter
Size:
1,271 bases
Orientation:
Plus strand

Genomic View for GC09P002100 Gene

Genes around GC09P002100 on UCSC Golden Path with GeneCards custom track

GC09P002100 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P002100 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P002100 Gene

ORGUL Member Location for GC09P002100 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P002100 Gene

Proteins for GC09P002100 Gene

Post-translational modifications for GC09P002100 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P002100 Gene

Domains & Families for GC09P002100 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P002100 Gene

Function for GC09P002100 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P002100 Gene

Localization for GC09P002100 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P002100 Gene

Pathways & Interactions for GC09P002100 Gene

SuperPathways for GC09P002100 Gene

No Data Available

Interacting Proteins for GC09P002100 Gene

Gene Ontology (GO) - Biological Process for GC09P002100 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P002100 Gene

Drugs & Compounds for GC09P002100 Gene

No Compound Related Data Available

Transcripts for GC09P002100 Gene

fRNAdb Secondary structures for GC09P002100 Gene

  • FR321482
  • FR311196

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P002100 Gene

No ASD Table

Relevant External Links for GC09P002100 Gene

GeneLoc Exon Structure for
GC09P002100

No data available for mRNA/cDNA for GC09P002100 Gene

Expression for GC09P002100 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P002100 Gene

Orthologs for GC09P002100 Gene

No data available for Orthologs and Evolution for GC09P002100 Gene

Paralogs for GC09P002100 Gene

No data available for Paralogs for GC09P002100 Gene

Variants for GC09P002100 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P002100 Gene

Disorders for GC09P002100 Gene

No disorders were found for GC09P002100 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P002100 Gene

Publications for GC09P002100 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC09P002100 Gene

Sources for GC09P002100 Gene

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