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Aliases for GC09P000333 Gene

Subcategory (RNA class) for GC09P000333 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC09P000333 Gene

No Aliases found

ORGUL Members for GC09P000333 Gene

No data available for External Ids for GC09P000333 Gene

Summaries for GC09P000333 Gene

GeneCards Summary for GC09P000333 Gene

GC09P000333 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC09P000333 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC09P000333

Additional gene information for GC09P000333 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P000333 Gene

Genomics for GC09P000333 Gene

Regulatory Elements for GC09P000333 Gene

Enhancers for GC09P000333 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H000336 0.8 ENCODE 0.7 +2.7 2688 0 SOX13 ESRRA FOXA2 THRB ZBTB40 TEAD3 CTBP1 GATA3 FOS NR2F6 DOCK8 GC09P000333 PIR47887
GH09H000295 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -36.3 -36266 2 CTCF EBF1 BATF FOSL1 POLR2A EED FOSL2 FOS PRDM10 ETV6 DOCK8 C9orf66 ENSG00000235880 CBWD1 KANK1 GC09M000242 GC09P000333
GH09H000307 1 ENCODE dbSUPER 0.3 -26.4 -26383 0 CTCF NR2F1 MAFG REST PPARG RAD21 ZNF316 GATA2 POLR2A SMC3 WASHC1 GC09M000242 GC09P000333
GH09H000303 0.8 ENCODE dbSUPER 0.3 -28.9 -28864 1 ZNF217 PKNOX1 GATA3 RFX1 SIN3A CHD1 CBWD1 DOCK8 WASHC1 GC09M000242 GC09P000333
GH09H000337 0.3 FANTOM5 0.7 +3.6 3575 0 DOCK8 GC09P000333 PIR47887
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09P000333 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09P000333 Gene

Chromosome:
9
Start:
333,518 bp from pter
End:
333,553 bp from pter
Size:
36 bases
Orientation:
Plus strand

Genomic View for GC09P000333 Gene

Genes around GC09P000333 on UCSC Golden Path with GeneCards custom track

GC09P000333 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P000333 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P000333 Gene

ORGUL Member Location for GC09P000333 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P000333 Gene

Proteins for GC09P000333 Gene

Post-translational modifications for GC09P000333 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P000333 Gene

Domains & Families for GC09P000333 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P000333 Gene

Function for GC09P000333 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P000333 Gene

Localization for GC09P000333 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P000333 Gene

Pathways & Interactions for GC09P000333 Gene

SuperPathways for GC09P000333 Gene

No Data Available

Interacting Proteins for GC09P000333 Gene

Gene Ontology (GO) - Biological Process for GC09P000333 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P000333 Gene

Drugs & Compounds for GC09P000333 Gene

No Compound Related Data Available

Transcripts for GC09P000333 Gene

fRNAdb Secondary structures for GC09P000333 Gene

  • FR003380
  • FR257287

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P000333 Gene

No ASD Table

Relevant External Links for GC09P000333 Gene

GeneLoc Exon Structure for
GC09P000333

No data available for mRNA/cDNA for GC09P000333 Gene

Expression for GC09P000333 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P000333 Gene

Orthologs for GC09P000333 Gene

No data available for Orthologs and Evolution for GC09P000333 Gene

Paralogs for GC09P000333 Gene

No data available for Paralogs for GC09P000333 Gene

Variants for GC09P000333 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09P000333 Gene

Disorders for GC09P000333 Gene

No disorders were found for GC09P000333 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P000333 Gene

Publications for GC09P000333 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC09P000333 Gene

Sources for GC09P000333 Gene

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