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Aliases for GC09M114616 Gene

Subcategory (RNA class) for GC09M114616 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC09M114616 Gene

No Aliases found

ORGUL Members for GC09M114616 Gene

No data available for External Ids for GC09M114616 Gene

Summaries for GC09M114616 Gene

GeneCards Summary for GC09M114616 Gene

GC09M114616 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC09M114616 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC09M114616 Gene

Genomics for GC09M114616 Gene

Regulatory Elements for GC09M114616 Gene

Enhancers for GC09M114616 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H114615 1.4 Ensembl ENCODE dbSUPER 0.7 -2.2 -2235 4 HDAC1 HDGF ATF1 TBL1XR1 RB1 RARA TCF12 CBX5 ZNF207 ETV6 WHRN TMEM268 GC09M114616 ENSG00000201749 TEX53
GH09H114610 1.4 ENCODE dbSUPER 0.7 +3.0 2958 4 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF766 WHRN TMEM268 GC09M114616 GC09P114612 ENSG00000201749
GH09H114622 0.8 ENCODE dbSUPER 0.4 -6.7 -6721 0 GATA3 STAT1 JUND BCL6B FOS BCL6 WHRN ENSG00000201749 GC09M114616 TEX53
GH09H114653 1 Ensembl ENCODE 0.3 -38.3 -38258 0 CTCF RB1 BACH1 RAD21 RELA RFX5 TEAD3 CC2D1A SMC3 ZNF143 TEX53 GC09M114616 ENSG00000201749
GH09H114662 0.7 ENCODE 0.2 -46.7 -46738 0 CTCF ZNF654 MAZ ZNF792 TRIM22 REST EBF1 RAD21 MTA1 TARDBP ENSG00000201749 TMEM268 WHRN TEX53 GC09M114616
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09M114616 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09M114616 Gene

Chromosome:
9
Start:
114,615,456 bp from pter
End:
114,615,568 bp from pter
Size:
113 bases
Orientation:
Minus strand

Genomic View for GC09M114616 Gene

Genes around GC09M114616 on UCSC Golden Path with GeneCards custom track

GC09M114616 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M114616 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M114616 Gene

Proteins for GC09M114616 Gene

Post-translational modifications for GC09M114616 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M114616 Gene

Domains & Families for GC09M114616 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M114616 Gene

Function for GC09M114616 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M114616 Gene

Localization for GC09M114616 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M114616 Gene

Pathways & Interactions for GC09M114616 Gene

SuperPathways for GC09M114616 Gene

No Data Available

Interacting Proteins for GC09M114616 Gene

Gene Ontology (GO) - Biological Process for GC09M114616 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M114616 Gene

Drugs & Compounds for GC09M114616 Gene

No Compound Related Data Available

Transcripts for GC09M114616 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M114616 Gene

No ASD Table

Relevant External Links for GC09M114616 Gene

GeneLoc Exon Structure for
GC09M114616

No data available for mRNA/cDNA for GC09M114616 Gene

Expression for GC09M114616 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M114616 Gene

Orthologs for GC09M114616 Gene

No data available for Orthologs and Evolution for GC09M114616 Gene

Paralogs for GC09M114616 Gene

No data available for Paralogs for GC09M114616 Gene

Variants for GC09M114616 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09M114616 Gene

Disorders for GC09M114616 Gene

No disorders were found for GC09M114616 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M114616 Gene

Publications for GC09M114616 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC09M114616 Gene

Sources for GC09M114616 Gene

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