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Aliases for GC09M100582 Gene

Subcategory (RNA class) for GC09M100582 Gene

7SK RNA

Quality Score for this RNA gene is

2

Aliases for GC09M100582 Gene

No Aliases found

ORGUL Members for GC09M100582 Gene

No data available for External Ids for GC09M100582 Gene

Summaries for GC09M100582 Gene

GeneCards Summary for GC09M100582 Gene

GC09M100582 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC09M100582 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC09M100582 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M100582 Gene

Genomics for GC09M100582 Gene

Regulatory Elements for GC09M100582 Gene

Enhancers for GC09M100582 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H100598 1.1 Ensembl ENCODE 0.4 -17.5 -17500 1 RB1 ARID4B SIN3A YY1 ETS1 ELK1 SCRT2 RCOR1 SP3 SP5 CAVIN4 MSANTD3 RN7SKP87 GC09M100582 PIR40273
GH09H100600 0.9 Ensembl ENCODE 0.4 -19.8 -19841 1 CTCF ZNF654 SAP130 TRIM22 ZEB2 RAD21 TEAD3 NFIC RFXANK ZNF143 CAVIN4 TMEFF1 INVS RN7SKP87 GC09M100582 PIR40273
GH09H100577 0.4 ENCODE 0.7 +0.8 784 5 ZNF24 CAVIN4 TMEFF1 GC09M100582 RN7SKP87
GH09H100595 0.7 ENCODE 0.4 -14.4 -14395 0 CTCF ARID4B EBF1 RAD21 RFX5 CC2D1A SMC3 ZNF143 PRDM10 MIXL1 TMEFF1 MSANTD3-TMEFF1 MSANTD3 GC09M100582 RN7SKP87 PIR40273
GH09H100586 0.5 ENCODE 0.4 -6.0 -5977 1 SOX13 JUND SOX6 RARA CAVIN4 TMEFF1 MSANTD3-TMEFF1 MSANTD3 GC09M100582 RN7SKP87 PIR40273
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09M100582 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09M100582 Gene

Chromosome:
9
Start:
100,581,049 bp from pter
End:
100,581,379 bp from pter
Size:
331 bases
Orientation:
Minus strand

Genomic View for GC09M100582 Gene

Genes around GC09M100582 on UCSC Golden Path with GeneCards custom track

GC09M100582 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M100582 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M100582 Gene

Proteins for GC09M100582 Gene

Post-translational modifications for GC09M100582 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M100582 Gene

Domains & Families for GC09M100582 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M100582 Gene

Function for GC09M100582 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M100582 Gene

Localization for GC09M100582 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M100582 Gene

Pathways & Interactions for GC09M100582 Gene

SuperPathways for GC09M100582 Gene

No Data Available

Interacting Proteins for GC09M100582 Gene

Gene Ontology (GO) - Biological Process for GC09M100582 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M100582 Gene

Drugs & Compounds for GC09M100582 Gene

No Compound Related Data Available

Transcripts for GC09M100582 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M100582 Gene

No ASD Table

Relevant External Links for GC09M100582 Gene

GeneLoc Exon Structure for
GC09M100582

No data available for mRNA/cDNA for GC09M100582 Gene

Expression for GC09M100582 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M100582 Gene

Orthologs for GC09M100582 Gene

No data available for Orthologs and Evolution for GC09M100582 Gene

Paralogs for GC09M100582 Gene

No data available for Paralogs for GC09M100582 Gene

Variants for GC09M100582 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09M100582 Gene

Disorders for GC09M100582 Gene

No disorders were found for GC09M100582 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M100582 Gene

Publications for GC09M100582 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

Products for GC09M100582 Gene

Sources for GC09M100582 Gene

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