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Aliases for GC09M099229 Gene

Subcategory (RNA class) for GC09M099229 Gene

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Quality Score for this RNA gene is

0.2

Aliases for GC09M099229 Gene

No Aliases found

ORGUL Members for GC09M099229 Gene

No data available for External Ids for GC09M099229 Gene

Summaries for GC09M099229 Gene

GeneCards Summary for GC09M099229 Gene

GC09M099229 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09M099229 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09M099229

Additional gene information for GC09M099229 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M099229 Gene

Genomics for GC09M099229 Gene

Regulatory Elements for GC09M099229 Gene

Enhancers for GC09M099229 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H099234 1.3 FANTOM5 ENCODE dbSUPER 0.4 -7.0 -6965 3 BACH1 BATF RFX5 RELA POLR2A EED ATF7 ETV6 RUNX3 IKZF2 KRT8P11 ALG2 SEC61B GC09P099237 GC09M099229
GH09H099220 1.3 ENCODE dbSUPER 0.4 +6.7 6720 3 HDGF PKNOX1 ARNT ZFP64 SIN3A DMAP1 ZBTB7B YY1 ZNF143 ZNF207 COL15A1 ENSG00000270412 KRT8P11 SEC61B GC09M099229
GH09H099231 0.7 ENCODE 0.7 -2.8 -2846 0 HDGF SMARCE1 CTCF BACH1 TRIM22 RAD21 SMARCA4 ZNF143 SMC3 ZNF24 ERP44 INVS RN7SL75P GC09M099229 GC09P099237
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09M099229 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09M099229 Gene

Chromosome:
9
Start:
99,229,080 bp from pter
End:
99,229,098 bp from pter
Size:
19 bases
Orientation:
Minus strand

Genomic View for GC09M099229 Gene

Genes around GC09M099229 on UCSC Golden Path with GeneCards custom track

GC09M099229 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M099229 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09M099229 Gene

ORGUL Member Location for GC09M099229 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M099229 Gene

Proteins for GC09M099229 Gene

Post-translational modifications for GC09M099229 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M099229 Gene

Domains & Families for GC09M099229 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M099229 Gene

Function for GC09M099229 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M099229 Gene

Localization for GC09M099229 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M099229 Gene

Pathways & Interactions for GC09M099229 Gene

SuperPathways for GC09M099229 Gene

No Data Available

Interacting Proteins for GC09M099229 Gene

Gene Ontology (GO) - Biological Process for GC09M099229 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M099229 Gene

Drugs & Compounds for GC09M099229 Gene

No Compound Related Data Available

Transcripts for GC09M099229 Gene

fRNAdb Secondary structures for GC09M099229 Gene

  • FR285440
  • FR042962

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M099229 Gene

No ASD Table

Relevant External Links for GC09M099229 Gene

GeneLoc Exon Structure for
GC09M099229

No data available for mRNA/cDNA for GC09M099229 Gene

Expression for GC09M099229 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M099229 Gene

Orthologs for GC09M099229 Gene

No data available for Orthologs and Evolution for GC09M099229 Gene

Paralogs for GC09M099229 Gene

No data available for Paralogs for GC09M099229 Gene

Variants for GC09M099229 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09M099229 Gene

Disorders for GC09M099229 Gene

No disorders were found for GC09M099229 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M099229 Gene

Publications for GC09M099229 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC09M099229 Gene

Sources for GC09M099229 Gene

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