Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC09M068936 Gene

Subcategory (RNA class) for GC09M068936 Gene


Quality Score for this RNA gene is


Aliases for GC09M068936 Gene

No Aliases found

ORGUL Members for GC09M068936 Gene

No data available for External Ids for GC09M068936 Gene

Summaries for GC09M068936 Gene

GeneCards Summary for GC09M068936 Gene

GC09M068936 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC09M068936 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M068936 Gene

Genomics for GC09M068936 Gene

Regulatory Elements for GC09M068936 Gene

Enhancers for GC09M068936 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G068933 1 ENCODE dbSUPER 0.7 +2.1 2082 1.5 HDGF TBL1XR1 BMI1 RELA ARID3A EED ETV6 RELB IKZF2 CREM PIP5K1B FAM122A ENSG00000236733 PRKACG GC09M068936 RNU6-820P GC09P068929
GH09G068951 1 FANTOM5 ENCODE 0.4 -16.1 -16060 1.3 JUNB TBX21 SP1 IKZF1 EED ZNF143 ETV6 RELB IKZF2 CREM PIP5K1B PRKACG FAM122A TJP2 GC09M068936 RNU6-820P LOC101927069
GH09G068973 1.1 Ensembl ENCODE 0.3 -39.0 -39049 2.9 HDAC1 PKNOX1 ATF1 TBL1XR1 RAD21 CBX5 ETV6 IKZF2 CREM JUNB PRKACG FAM122A PIP5K1B LOC101927069 GC09M068936 RNU6-820P
GH09G068947 0.8 ENCODE dbSUPER 0.4 -12.2 -12221 0.6 ATF3 ZBED1 IKZF1 JUNB PIP5K1B FAM122A PRKACG RNU6-820P GC09M068936 LOC101927069
GH09G068969 1 ENCODE 0.3 -34.0 -33999 1.2 FOXA2 ATF1 MLX ARID4B DMAP1 SP5 PPARG ZNF592 KAT8 MIER3 PIP5K1B RNU6-820P PRKACG LOC101927069 GC09M068936
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09M068936 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09M068936 Gene

68,935,872 bp from pter
68,935,979 bp from pter
108 bases
Minus strand

Genomic View for GC09M068936 Gene

Genes around GC09M068936 on UCSC Golden Path with GeneCards custom track

GC09M068936 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M068936 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M068936 Gene

Proteins for GC09M068936 Gene

Post-translational modifications for GC09M068936 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M068936 Gene

Domains & Families for GC09M068936 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M068936 Gene

Function for GC09M068936 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M068936 Gene

Localization for GC09M068936 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC09M068936 Gene

Pathways & Interactions for GC09M068936 Gene

SuperPathways for GC09M068936 Gene

No Data Available

Interacting Proteins for GC09M068936 Gene

Gene Ontology (GO) - Biological Process for GC09M068936 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09M068936 Gene

Drugs & Compounds for GC09M068936 Gene

No Compound Related Data Available

Transcripts for GC09M068936 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M068936 Gene

No ASD Table

Relevant External Links for GC09M068936 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09M068936 Gene

Expression for GC09M068936 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M068936 Gene

Orthologs for GC09M068936 Gene

No data available for Orthologs and Evolution for GC09M068936 Gene

Paralogs for GC09M068936 Gene

No data available for Paralogs for GC09M068936 Gene

Variants for GC09M068936 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09M068936 Gene

Disorders for GC09M068936 Gene

No disorders were found for GC09M068936 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M068936 Gene

Publications for GC09M068936 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC09M068936 Gene

Sources for GC09M068936 Gene

Loading form....