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Aliases for GC09M033166 Gene

Subcategory (RNA class) for GC09M033166 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC09M033166 Gene

No Aliases found

No data available for External Ids for GC09M033166 Gene

Summaries for GC09M033166 Gene

GeneCards Summary for GC09M033166 Gene

GC09M033166 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC09M033166 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC09M033166

Additional gene information for GC09M033166 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M033166 Gene

Genomics for GC09M033166 Gene

GeneHancer (GH) Regulatory Elements for GC09M033166 Gene

Promoters and enhancers for GC09M033166 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I033286 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.8 +4.9 4910 13 CLOCK MLX DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC MEF2D NFX1 PIR32325 B4GALT1 BAG1 ENSG00000228352 DFFBP1 ANXA2P2 SMU1 CHMP5 DDX58
GH09I033262 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 +33.6 33552 3.6 HDGF FOXA2 ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 IRF4 YY1 BAG1 CHMP5 GC09M033264 NFX1 GC09M033252 GC09M033166 GC09M033167 GC09M033168
GH09I033327 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -31.3 -31294 3.4 PKNOX1 FOXA2 CLOCK NFIB NEUROD1 SIN3A RAD21 BRCA1 RFX5 YY1 NFX1 BAG1 CHMP5 LOC105376020 AQP7 NOL6 GC09P033345 PIR45697 GC09M033166
GH09I033318 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -22.8 -22785 4.8 PAF1 STAT1 JUN SIX5 CEBPB SIN3A EP300 SP1 MAFF JUND NFX1 BAG1 CHMP5 LOC105376020 AQP7 AQP3 B4GALT1 B4GALT1-AS1 GC09M033166 GC09P033345
GH09I033300 Enhancer 0.4 dbSUPER 0.8 -2.9 -2892 1.2 HNF4G HNF4A ZNF644 BAG1 GC09M033166 NFX1 GC09P033345 PIR45697
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09M033166 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M033166 Gene

Genomic Locations for GC09M033166 Gene
chr9:33,166,116-33,298,037
(GRCh38/hg38)
Size:
131,922 bases
Orientation:
Minus strand

Genomic View for GC09M033166 Gene

Genes around GC09M033166 on UCSC Golden Path with GeneCards custom track

GC09M033166 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M033166 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09M033166 Gene

ORGUL Member Location for GC09M033166 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M033166 Gene

Proteins for GC09M033166 Gene

Post-translational modifications for GC09M033166 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M033166 Gene

Domains & Families for GC09M033166 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M033166 Gene

Function for GC09M033166 Gene

Phenotypes From GWAS Catalog for GC09M033166 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M033166 Gene

Localization for GC09M033166 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M033166 Gene

Pathways & Interactions for GC09M033166 Gene

SuperPathways for GC09M033166 Gene

No Data Available

Interacting Proteins for GC09M033166 Gene

Gene Ontology (GO) - Biological Process for GC09M033166 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M033166 Gene

Drugs & Compounds for GC09M033166 Gene

No Compound Related Data Available

Transcripts for GC09M033166 Gene

fRNAdb Secondary structures for GC09M033166 Gene

  • FR407576
  • FR407555

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M033166 Gene

No ASD Table

Relevant External Links for GC09M033166 Gene

GeneLoc Exon Structure for
GC09M033166

No data available for mRNA/cDNA for GC09M033166 Gene

Expression for GC09M033166 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M033166 Gene

Orthologs for GC09M033166 Gene

No data available for Orthologs and Evolution for GC09M033166 Gene

Paralogs for GC09M033166 Gene

No data available for Paralogs for GC09M033166 Gene

Variants for GC09M033166 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M033166 Gene

Disorders for GC09M033166 Gene

No disorders were found for GC09M033166 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M033166 Gene

Publications for GC09M033166 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC09M033166 Gene

Sources for GC09M033166 Gene

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