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Aliases for GC09M023765 Gene

Subcategory (RNA class) for GC09M023765 Gene

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Quality Score for this RNA gene is

6.2

Aliases for GC09M023765 Gene

No Aliases found

No data available for External Ids for GC09M023765 Gene

Summaries for GC09M023765 Gene

GeneCards Summary for GC09M023765 Gene

GC09M023765 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09M023765 Gene - the ORGUL cluster for this gene includes several descriptions:

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09M023765

Additional gene information for GC09M023765 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M023765 Gene

Genomics for GC09M023765 Gene

Regulatory Elements for GC09M023765 Gene

Enhancers for GC09M023765 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H023778 0.9 Ensembl ENCODE 0.4 -13.9 -13894 1 KLF1 ZNF362 ZNF680 ZFHX2 PRDM6 PRDM10 PRDM1 TRIM28 EGR2 ZNF18 LOC105375992 ELAVL2 GC09M023765
GH09H023767 0.5 Ensembl ENCODE 0.7 -4.4 -4445 3 GC09M023765 LOC105375992
GH09H023825 1 ENCODE 0.2 -61.1 -61130 1 PKNOX1 FEZF1 ZNF2 ZNF143 SP3 TSHZ1 REST ZNF518A ZNF610 GLIS1 LOC105375992 GC09M023765
GH09H023821 0.9 ENCODE 0.2 -56.5 -56491 1 ZNF76 KLF17 GLI4 ZNF2 GLIS2 EGR2 SP3 REST ZNF398 ZNF610 LOC105375992 GC09M023765
GH09H023820 0.6 ENCODE 0.2 -55.6 -55638 0 CTCF MXI1 L3MBTL2 SUZ12 POLR2A ZBTB26 EZH2 LOC105375992 GC09M023765
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC09M023765 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC09M023765 Gene

Chromosome:
9
Start:
23,765,008 bp from pter
End:
23,765,110 bp from pter
Size:
103 bases
Orientation:
Minus strand

Genomic View for GC09M023765 Gene

Genes around GC09M023765 on UCSC Golden Path with GeneCards custom track

GC09M023765 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M023765 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09M023765 Gene

ORGUL Member Location for GC09M023765 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M023765 Gene

Proteins for GC09M023765 Gene

Post-translational modifications for GC09M023765 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M023765 Gene

Domains & Families for GC09M023765 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M023765 Gene

Function for GC09M023765 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M023765 Gene

Localization for GC09M023765 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M023765 Gene

Pathways & Interactions for GC09M023765 Gene

SuperPathways for GC09M023765 Gene

No Data Available

Interacting Proteins for GC09M023765 Gene

Gene Ontology (GO) - Biological Process for GC09M023765 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M023765 Gene

Drugs & Compounds for GC09M023765 Gene

No Compound Related Data Available

Transcripts for GC09M023765 Gene

fRNAdb Secondary structures for GC09M023765 Gene

  • FR377486
  • FR257979

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M023765 Gene

No ASD Table

Relevant External Links for GC09M023765 Gene

GeneLoc Exon Structure for
GC09M023765

No data available for mRNA/cDNA for GC09M023765 Gene

Expression for GC09M023765 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M023765 Gene

Orthologs for GC09M023765 Gene

No data available for Orthologs and Evolution for GC09M023765 Gene

Paralogs for GC09M023765 Gene

No data available for Paralogs for GC09M023765 Gene

Variants for GC09M023765 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC09M023765 Gene

Disorders for GC09M023765 Gene

No disorders were found for GC09M023765 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M023765 Gene

Publications for GC09M023765 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  4. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC09M023765 Gene

Sources for GC09M023765 Gene

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