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Aliases for GC08P144288 Gene

Subcategory (RNA class) for GC08P144288 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for GC08P144288 Gene

No Aliases found

ORGUL Members for GC08P144288 Gene

No data available for External Ids for GC08P144288 Gene

Summaries for GC08P144288 Gene

GeneCards Summary for GC08P144288 Gene

GC08P144288 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC08P144288 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC08P144288 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P144288 Gene

Genomics for GC08P144288 Gene

GeneHancer (GH) Regulatory Elements for GC08P144288 Gene

Promoters and enhancers for GC08P144288 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I144290 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.8 +4.5 4509 6 PKNOX1 CLOCK ATF1 ARNT ARID4B NEUROD1 SIN3A YY1 GATA2 ELK1 BOP1 HSF1 ZNF7 CPSF1 VPS28 ZNF623 SLC52A2 DGAT1 ENSG00000254690 COMMD5
GH08I144322 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +36.1 36142 5.5 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 DGAT1 SHARPIN BOP1 CPSF1 HSF1 ZNF7 ZNF707 ZNF16 KIFC2 MIR6848
GH08I144353 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 0.2 +67.6 67619 6.7 PKNOX1 ARID4B SIN3A DMAP1 POLR2B E2F8 ZNF207 ZNF143 SP3 NFYC ENSG00000271698 SLC52A2 TMEM249 FBXL6 CPSF1 VPS28 SHARPIN HSF1 ZNF7 ZNF707
GH08I144372 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.2 +85.1 85074 3 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZBTB7B YY1 POLR2B CBX5 ZNF207 LOC101928902 ADCK5 CPSF1 LRRC14 ZNF517 TONSL DGAT1 MIR939 GC08P144288
GH08I144310 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +24.8 24760 6.1 HDGF PKNOX1 ARID4B SIN3A ZNF48 TCF12 GLIS2 GATA2 ZNF143 DEK GC08P144315 GC08P144314 ENSG00000254690 BOP1 KIFC2 VPS28 PIR35534 GC08P144309 DGAT1 HSF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P144288 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P144288 Gene

Genomic Locations for GC08P144288 Gene
chr8:144,288,893-144,499,501
(GRCh38/hg38)
Size:
210,609 bases
Orientation:
Plus strand

Genomic View for GC08P144288 Gene

Genes around GC08P144288 on UCSC Golden Path with GeneCards custom track

GC08P144288 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P144288 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P144288 Gene

ORGUL Member Location for GC08P144288 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P144288 Gene

Proteins for GC08P144288 Gene

Post-translational modifications for GC08P144288 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P144288 Gene

Domains & Families for GC08P144288 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P144288 Gene

Function for GC08P144288 Gene

Phenotypes From GWAS Catalog for GC08P144288 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P144288 Gene

Localization for GC08P144288 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P144288 Gene

Pathways & Interactions for GC08P144288 Gene

SuperPathways for GC08P144288 Gene

No Data Available

Interacting Proteins for GC08P144288 Gene

Gene Ontology (GO) - Biological Process for GC08P144288 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P144288 Gene

Drugs & Compounds for GC08P144288 Gene

No Compound Related Data Available

Transcripts for GC08P144288 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P144288 Gene

No ASD Table

Relevant External Links for GC08P144288 Gene

GeneLoc Exon Structure for
GC08P144288

No data available for mRNA/cDNA for GC08P144288 Gene

Expression for GC08P144288 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P144288 Gene

Orthologs for GC08P144288 Gene

No data available for Orthologs and Evolution for GC08P144288 Gene

Paralogs for GC08P144288 Gene

No data available for Paralogs for GC08P144288 Gene

Variants for GC08P144288 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P144288 Gene

Disorders for GC08P144288 Gene

No disorders were found for GC08P144288 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P144288 Gene

Publications for GC08P144288 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC08P144288 Gene

Sources for GC08P144288 Gene

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