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Aliases for GC08P133070 Gene

Subcategory (RNA class) for GC08P133070 Gene

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Quality Score for this RNA gene is

0.2

Aliases for GC08P133070 Gene

No Aliases found

ORGUL Members for GC08P133070 Gene

No data available for External Ids for GC08P133070 Gene

Summaries for GC08P133070 Gene

GeneCards Summary for GC08P133070 Gene

GC08P133070 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P133070 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P133070

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P133070 Gene

Genomics for GC08P133070 Gene

Regulatory Elements for GC08P133070 Gene

Enhancers for GC08P133070 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G133051 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.7 -5679 25.8 CTCF PKNOX1 ZNF146 MAX RAD21 GATA3 POLR2A FOS MAFK RFX1 TG WISP1 SLA TMEM71 PHF20L1 ENSG00000270137 GC08P133054 GC08P133070
GH08G133080 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +11.8 11781 3.2 CTCF ZFP64 ZNF140 CEBPG RAD21 ZNF697 ZNF433 ZBTB11 CEBPB ZNF426 TMEM71 PHF20L1 WISP1 SLA ST3GAL1 TG GC08P133070
GH08G133091 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +22.6 22584 2.5 CTCF HDGF NFIB PLRG1 ATM ARID3A POLR2A ZNF207 NBN CREB1 SLA TG WISP1 ST3GAL1 GC08P133070
GH08G133077 1 FANTOM5 ENCODE dbSUPER 0.4 +7.8 7795 0.7 MAX TMEM71 PHF20L1 WISP1 SLA ST3GAL1 GC08P133070
GH08G133095 0.7 ENCODE dbSUPER 0.3 +25.5 25459 0.2 CREB1 ATF2 WISP1 SLA GC08P133070
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P133070 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P133070 Gene

Chromosome:
8
Start:
133,070,373 bp from pter
End:
133,070,390 bp from pter
Size:
18 bases
Orientation:
Plus strand

Genomic View for GC08P133070 Gene

Genes around GC08P133070 on UCSC Golden Path with GeneCards custom track

GC08P133070 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P133070 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P133070 Gene

ORGUL Member Location for GC08P133070 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P133070 Gene

Proteins for GC08P133070 Gene

Post-translational modifications for GC08P133070 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P133070 Gene

Domains & Families for GC08P133070 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P133070 Gene

Function for GC08P133070 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P133070 Gene

Localization for GC08P133070 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08P133070 Gene

Pathways & Interactions for GC08P133070 Gene

SuperPathways for GC08P133070 Gene

No Data Available

Interacting Proteins for GC08P133070 Gene

Gene Ontology (GO) - Biological Process for GC08P133070 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P133070 Gene

Drugs & Compounds for GC08P133070 Gene

No Compound Related Data Available

Transcripts for GC08P133070 Gene

fRNAdb Secondary structures for GC08P133070 Gene

  • FR013274
  • FR291908

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P133070 Gene

No ASD Table

Relevant External Links for GC08P133070 Gene

GeneLoc Exon Structure for
GC08P133070

No data available for mRNA/cDNA for GC08P133070 Gene

Expression for GC08P133070 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P133070 Gene

Orthologs for GC08P133070 Gene

No data available for Orthologs and Evolution for GC08P133070 Gene

Paralogs for GC08P133070 Gene

No data available for Paralogs for GC08P133070 Gene

Variants for GC08P133070 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P133070 Gene

Disorders for GC08P133070 Gene

No disorders were found for GC08P133070 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P133070 Gene

Publications for GC08P133070 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC08P133070 Gene

Sources for GC08P133070 Gene

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