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Aliases for GC08P132799 Gene

Subcategory (RNA class) for GC08P132799 Gene

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Quality Score for this RNA gene is

0.2

Aliases for GC08P132799 Gene

No Aliases found

ORGUL Members for GC08P132799 Gene

No data available for External Ids for GC08P132799 Gene

Summaries for GC08P132799 Gene

GeneCards Summary for GC08P132799 Gene

GC08P132799 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P132799 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P132799

Additional gene information for GC08P132799 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P132799 Gene

Genomics for GC08P132799 Gene

Regulatory Elements for GC08P132799 Gene

Enhancers for GC08P132799 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H132774 1.3 ENCODE dbSUPER 0.3 -23.7 -23672 2 PKNOX1 ATF1 MLX ARNT ARID4B SIN3A DMAP1 YY1 ETS1 ELK1 ENSG00000223697 PHF20L1 TMEM71 GC08P132799
GH08H132792 0.9 ENCODE 0.4 -6.7 -6700 0 HDAC1 ATF1 FOXA2 RB1 ARNT CHAMP1 TCF12 FOS ATF7 ZEB2 GC08P132799 PHF20L1
GH08H132793 0.6 ENCODE 0.4 -6.1 -6137 0 TFDP1 ATF1 BACH1 FOXJ2 KDM1A NR2C2 LRRC6 GC08P132799 PHF20L1
GH08H132784 0.5 dbSUPER 0.4 -14.2 -14214 1 MAFF ZNF316 MAFG EMSY MAFK TMEM71 PHF20L1 GC08P132799
GH08H132789 0.4 dbSUPER 0.4 -8.7 -8678 1 HMBOX1 PHF20L1 TMEM71 GC08P132799
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P132799 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P132799 Gene

Chromosome:
8
Start:
132,799,241 bp from pter
End:
132,799,258 bp from pter
Size:
18 bases
Orientation:
Plus strand

Genomic View for GC08P132799 Gene

Genes around GC08P132799 on UCSC Golden Path with GeneCards custom track

GC08P132799 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P132799 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P132799 Gene

ORGUL Member Location for GC08P132799 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P132799 Gene

Proteins for GC08P132799 Gene

Post-translational modifications for GC08P132799 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P132799 Gene

Domains & Families for GC08P132799 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P132799 Gene

Function for GC08P132799 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P132799 Gene

Localization for GC08P132799 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P132799 Gene

Pathways & Interactions for GC08P132799 Gene

SuperPathways for GC08P132799 Gene

No Data Available

Interacting Proteins for GC08P132799 Gene

Gene Ontology (GO) - Biological Process for GC08P132799 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P132799 Gene

Drugs & Compounds for GC08P132799 Gene

No Compound Related Data Available

Transcripts for GC08P132799 Gene

fRNAdb Secondary structures for GC08P132799 Gene

  • FR174921

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P132799 Gene

No ASD Table

Relevant External Links for GC08P132799 Gene

GeneLoc Exon Structure for
GC08P132799

No data available for mRNA/cDNA for GC08P132799 Gene

Expression for GC08P132799 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P132799 Gene

Orthologs for GC08P132799 Gene

No data available for Orthologs and Evolution for GC08P132799 Gene

Paralogs for GC08P132799 Gene

No data available for Paralogs for GC08P132799 Gene

Variants for GC08P132799 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P132799 Gene

Disorders for GC08P132799 Gene

No disorders were found for GC08P132799 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P132799 Gene

Publications for GC08P132799 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC08P132799 Gene

Sources for GC08P132799 Gene

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