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Aliases for GC08P128221 Gene

Subcategory (RNA class) for GC08P128221 Gene

7SK RNA

Quality Score for this RNA gene is

2

Aliases for GC08P128221 Gene

No Aliases found

ORGUL Members for GC08P128221 Gene

No data available for External Ids for GC08P128221 Gene

Summaries for GC08P128221 Gene

GeneCards Summary for GC08P128221 Gene

GC08P128221 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC08P128221 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC08P128221 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P128221 Gene

Genomics for GC08P128221 Gene

Regulatory Elements for GC08P128221 Gene

Enhancers for GC08P128221 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H128171 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -44.1 -44120 9 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A YBX1 FEZF1 DMAP1 ZBTB7B MIR1208 MIR1207 CASC11 MYC RNU4-25P GC08P128172 GC08P128221
GH08H128181 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -36.5 -36468 5 HDGF FOXA2 ATF1 MLX ZFP64 ARID4B YBX1 DMAP1 ZBTB7B TCF12 MYC MIR1208 MIR1207 CASC11 RNU1-106P TMEM75 RNU4-25P GC08P128172 GC08P128221
GH08H128196 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -23.0 -23034 1 HDGF PKNOX1 FOXA2 ATF1 MLX YY1 FOS SP5 MXD4 NFYC GC08P128221 GC08P128172
GH08H128201 1.1 Ensembl ENCODE dbSUPER 0.4 -18.5 -18457 0 GATA3 RFX1 ELF1 DPF2 RAD21 ZBTB40 MAFK GC08P128221 GC08P128172
GH08H128204 0.9 ENCODE dbSUPER 0.4 -15.3 -15331 1 ELF1 ZEB2 GATA3 ZNF610 IKZF1 ZNF24 IKZF2 RUNX3 SPI1 CASC11 MYC MIR1208 MIR1204 PVT1 GC08P128221 GC08P128172
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P128221 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P128221 Gene

Chromosome:
8
Start:
128,220,503 bp from pter
End:
128,220,803 bp from pter
Size:
301 bases
Orientation:
Plus strand

Genomic View for GC08P128221 Gene

Genes around GC08P128221 on UCSC Golden Path with GeneCards custom track

GC08P128221 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P128221 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P128221 Gene

Proteins for GC08P128221 Gene

Post-translational modifications for GC08P128221 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P128221 Gene

Domains & Families for GC08P128221 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P128221 Gene

Function for GC08P128221 Gene

Phenotypes From GWAS Catalog for GC08P128221 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P128221 Gene

Localization for GC08P128221 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P128221 Gene

Pathways & Interactions for GC08P128221 Gene

SuperPathways for GC08P128221 Gene

No Data Available

Interacting Proteins for GC08P128221 Gene

Gene Ontology (GO) - Biological Process for GC08P128221 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P128221 Gene

Drugs & Compounds for GC08P128221 Gene

No Compound Related Data Available

Transcripts for GC08P128221 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P128221 Gene

No ASD Table

Relevant External Links for GC08P128221 Gene

GeneLoc Exon Structure for
GC08P128221

No data available for mRNA/cDNA for GC08P128221 Gene

Expression for GC08P128221 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P128221 Gene

Orthologs for GC08P128221 Gene

No data available for Orthologs and Evolution for GC08P128221 Gene

Paralogs for GC08P128221 Gene

No data available for Paralogs for GC08P128221 Gene

Variants for GC08P128221 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P128221 Gene

Disorders for GC08P128221 Gene

No disorders were found for GC08P128221 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P128221 Gene

Publications for GC08P128221 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

Products for GC08P128221 Gene

Sources for GC08P128221 Gene

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