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Aliases for GC08P124718 Gene

Subcategory (RNA class) for GC08P124718 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC08P124718 Gene

No Aliases found

ORGUL Members for GC08P124718 Gene

No data available for External Ids for GC08P124718 Gene

Summaries for GC08P124718 Gene

GeneCards Summary for GC08P124718 Gene

GC08P124718 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P124718 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P124718

Additional gene information for GC08P124718 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P124718 Gene

Genomics for GC08P124718 Gene

Regulatory Elements for GC08P124718 Gene

Enhancers for GC08P124718 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H124720 1.4 Ensembl ENCODE dbSUPER 0.7 +2.4 2435 1 FOXA2 ARID4B YY1 SLC30A9 SP5 REST MIER2 PPARG KAT8 NFIL3 NDUFB9 MTSS1 GC08P124718
GH08H124708 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.2 -8189 3 TBL1XR1 EBF1 RELA ZNF7 ATF7 RUNX3 IKZF2 CREM IRF5 TRIM22 ZNF572 NDUFB9 TATDN1 NSMCE2 MTSS1 WASHC5 RNF139 GC08P124718 GC08P124592
GH08H124724 1.5 Ensembl ENCODE dbSUPER 0.4 +8.5 8468 5 FOXA2 ARID4B SIN3A YY1 SLC30A9 GLIS2 ELK1 MXD4 REST MIER2 NSMCE2 TATDN1 TRMT12 MTSS1 GC08P124718
GH08H124714 0.8 ENCODE dbSUPER 0.7 -4.1 -4066 0 JUND ATF3 CREB1 MAX HNF4A REST YY1 GC08P124718 GC08P124592
GH08H124685 1.5 Ensembl ENCODE dbSUPER 0.3 -30.2 -30212 5 HDGF PKNOX1 FOXA2 ZFP64 ARID4B YBX1 FEZF1 ETS1 ZNF766 GATA2 WASHC5-AS1 FAM91A1 ZNF572 TRMT12 MTSS1 WASHC5 RNF139 NDUFB9 TATDN1 GC08P124718
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P124718 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P124718 Gene

Chromosome:
8
Start:
124,718,230 bp from pter
End:
124,718,351 bp from pter
Size:
122 bases
Orientation:
Plus strand

Genomic View for GC08P124718 Gene

Genes around GC08P124718 on UCSC Golden Path with GeneCards custom track

GC08P124718 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P124718 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P124718 Gene

ORGUL Member Location for GC08P124718 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P124718 Gene

Proteins for GC08P124718 Gene

Post-translational modifications for GC08P124718 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P124718 Gene

Domains & Families for GC08P124718 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P124718 Gene

Function for GC08P124718 Gene

Phenotypes From GWAS Catalog for GC08P124718 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P124718 Gene

Localization for GC08P124718 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P124718 Gene

Pathways & Interactions for GC08P124718 Gene

SuperPathways for GC08P124718 Gene

No Data Available

Interacting Proteins for GC08P124718 Gene

Gene Ontology (GO) - Biological Process for GC08P124718 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P124718 Gene

Drugs & Compounds for GC08P124718 Gene

No Compound Related Data Available

Transcripts for GC08P124718 Gene

fRNAdb Secondary structures for GC08P124718 Gene

  • FR025985
  • FR118895

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P124718 Gene

No ASD Table

Relevant External Links for GC08P124718 Gene

GeneLoc Exon Structure for
GC08P124718

No data available for mRNA/cDNA for GC08P124718 Gene

Expression for GC08P124718 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P124718 Gene

Orthologs for GC08P124718 Gene

No data available for Orthologs and Evolution for GC08P124718 Gene

Paralogs for GC08P124718 Gene

No data available for Paralogs for GC08P124718 Gene

Variants for GC08P124718 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P124718 Gene

Disorders for GC08P124718 Gene

No disorders were found for GC08P124718 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P124718 Gene

Publications for GC08P124718 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P124718 Gene

Sources for GC08P124718 Gene

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