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Aliases for GC08P116092 Gene

Subcategory (RNA class) for GC08P116092 Gene

undefined

Quality Score for this RNA gene is

0.4

Aliases for GC08P116092 Gene

No Aliases found

ORGUL Members for GC08P116092 Gene

No data available for External Ids for GC08P116092 Gene

Summaries for GC08P116092 Gene

GeneCards Summary for GC08P116092 Gene

GC08P116092 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P116092 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P116092

Additional gene information for GC08P116092 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P116092 Gene

Genomics for GC08P116092 Gene

Regulatory Elements for GC08P116092 Gene

Enhancers for GC08P116092 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H116058 1.3 FANTOM5 Ensembl ENCODE 0.3 -34.7 -34674 0 CEBPB MAX CEBPG EP300 RAD21 YY1 IRF9 JUND ATF3 FOXP2 TRPS1 GC08P116031 GC08P116092
GH08H116056 1 FANTOM5 Ensembl 0.3 -35.7 -35692 0 FOXA2 MAX REST RAD21 FOXA1 YY1 JUND ATF3 POLR2A ZBTB33 TRPS1 GC08P116031 GC08P116092
GH08H116089 0.4 ENCODE 0.7 -3.4 -3436 0 RFX1 GC08P116092 GC08P116031
GH08H116112 0.6 Ensembl ENCODE 0.4 +19.6 19627 0 FOS GC08P116092 GC08M116001
GH08H116036 1.2 FANTOM5 Ensembl ENCODE 0.2 -55.3 -55322 2 JUN MAFG CEBPB JUND GATA3 ZNF316 POU5F1 MAFK TRPS1 GC08P116031 GC08P116092
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P116092 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P116092 Gene

Chromosome:
8
Start:
116,092,975 bp from pter
End:
116,093,135 bp from pter
Size:
161 bases
Orientation:
Plus strand

Genomic View for GC08P116092 Gene

Genes around GC08P116092 on UCSC Golden Path with GeneCards custom track

GC08P116092 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P116092 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P116092 Gene

ORGUL Member Location for GC08P116092 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P116092 Gene

Proteins for GC08P116092 Gene

Post-translational modifications for GC08P116092 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P116092 Gene

Domains & Families for GC08P116092 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P116092 Gene

Function for GC08P116092 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P116092 Gene

Localization for GC08P116092 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P116092 Gene

Pathways & Interactions for GC08P116092 Gene

SuperPathways for GC08P116092 Gene

No Data Available

Interacting Proteins for GC08P116092 Gene

Gene Ontology (GO) - Biological Process for GC08P116092 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P116092 Gene

Drugs & Compounds for GC08P116092 Gene

No Compound Related Data Available

Transcripts for GC08P116092 Gene

fRNAdb Secondary structures for GC08P116092 Gene

  • FR016400
  • FR286898

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P116092 Gene

No ASD Table

Relevant External Links for GC08P116092 Gene

GeneLoc Exon Structure for
GC08P116092

No data available for mRNA/cDNA for GC08P116092 Gene

Expression for GC08P116092 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P116092 Gene

Orthologs for GC08P116092 Gene

No data available for Orthologs and Evolution for GC08P116092 Gene

Paralogs for GC08P116092 Gene

No data available for Paralogs for GC08P116092 Gene

Variants for GC08P116092 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P116092 Gene

Disorders for GC08P116092 Gene

No disorders were found for GC08P116092 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P116092 Gene

Publications for GC08P116092 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P116092 Gene

Sources for GC08P116092 Gene

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