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Aliases for GC08P105509 Gene

Subcategory (RNA class) for GC08P105509 Gene


Quality Score for this RNA gene is


Aliases for GC08P105509 Gene

No Aliases found

ORGUL Members for GC08P105509 Gene

No data available for External Ids for GC08P105509 Gene

Summaries for GC08P105509 Gene

GeneCards Summary for GC08P105509 Gene

GC08P105509 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P105509 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P105509

Additional gene information for GC08P105509 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P105509 Gene

Genomics for GC08P105509 Gene

Regulatory Elements for GC08P105509 Gene

Enhancers for GC08P105509 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H105517 1.1 Ensembl ENCODE 0.4 +8.7 8737 2 FOXA2 JUN ZSCAN4 INSM2 FOSL1 CC2D1A ZNF366 SCRT2 FOS KLF8 ZFPM2 GC08P105509 GC08P105553
GH08H105498 0.9 FANTOM5 ENCODE 0.4 -10.2 -10163 1 L3MBTL2 SOX6 TAL1 TCF12 PRDM6 NCOR1 SMARCA4 IKZF1 BCL6B KLF8 ZFPM2 GC08P105509 GC08M105157
GH08H105520 0.9 ENCODE 0.4 +11.2 11158 0 HDAC1 PKNOX1 ATF1 TBL1XR1 ARNT CHAMP1 TCF12 GATA2 SIRT6 RCOR1 GC08P105509 GC08P105553
GH08H105508 0.5 ENCODE 0.7 -1.3 -1263 0 OSR2 GATA3 CTBP1 IKZF1 HMBOX1 GC08P105509 GC08M105157
GH08H105524 0.6 ENCODE 0.4 +15.1 15077 0 ZNF316 ZSCAN4 MAFG EMSY MAFK TRIM28 GC08P105509 GC08P105553
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P105509 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P105509 Gene

105,509,510 bp from pter
105,509,706 bp from pter
197 bases
Plus strand

Genomic View for GC08P105509 Gene

Genes around GC08P105509 on UCSC Golden Path with GeneCards custom track

GC08P105509 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P105509 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P105509 Gene

ORGUL Member Location for GC08P105509 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P105509 Gene

Proteins for GC08P105509 Gene

Post-translational modifications for GC08P105509 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P105509 Gene

Domains & Families for GC08P105509 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P105509 Gene

Function for GC08P105509 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P105509 Gene

Localization for GC08P105509 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P105509 Gene

Pathways & Interactions for GC08P105509 Gene

SuperPathways for GC08P105509 Gene

No Data Available

Interacting Proteins for GC08P105509 Gene

Gene Ontology (GO) - Biological Process for GC08P105509 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P105509 Gene

Drugs & Compounds for GC08P105509 Gene

No Compound Related Data Available

Transcripts for GC08P105509 Gene

fRNAdb Secondary structures for GC08P105509 Gene

  • FR266299
  • FR244289

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P105509 Gene

No ASD Table

Relevant External Links for GC08P105509 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P105509 Gene

Expression for GC08P105509 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P105509 Gene

Orthologs for GC08P105509 Gene

No data available for Orthologs and Evolution for GC08P105509 Gene

Paralogs for GC08P105509 Gene

No data available for Paralogs for GC08P105509 Gene

Variants for GC08P105509 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P105509 Gene

Disorders for GC08P105509 Gene

No disorders were found for GC08P105509 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P105509 Gene

Publications for GC08P105509 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P105509 Gene

Sources for GC08P105509 Gene

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