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Aliases for GC08P098141 Gene

Subcategory (RNA class) for GC08P098141 Gene

tRNA

Quality Score for this RNA gene is

2.2

Aliases for GC08P098141 Gene

No Aliases found

ORGUL Members for GC08P098141 Gene

No data available for External Ids for GC08P098141 Gene

Summaries for GC08P098141 Gene

GeneCards Summary for GC08P098141 Gene

GC08P098141 is an RNA Gene, and is affiliated with the tRNA class.

fRNAdb sequence ontologies for GC08P098141 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P098141

Additional gene information for GC08P098141 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P098141 Gene

Genomics for GC08P098141 Gene

Regulatory Elements for GC08P098141 Gene

Enhancers for GC08P098141 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H098151 1 Ensembl ENCODE dbSUPER 0.4 +11.5 11511 3 ZFHX2 KLF1 RFX1 FOS EGR2 MATN2 RIDA GC08P098161 GC08P098141
GH08H098145 0.8 ENCODE dbSUPER 0.4 +5.9 5880 2 ZNF121 ZNF766 JUND JUN IKZF1 GC08P098141 GC08P098161
GH08H098157 0.8 ENCODE dbSUPER 0.4 +17.5 17463 3 SREBF1 JUND ZNF584 CEBPG RNU6-914P GC08P098161 GC08P098141
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P098141 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P098141 Gene

Chromosome:
8
Start:
98,141,233 bp from pter
End:
98,141,302 bp from pter
Size:
70 bases
Orientation:
Plus strand

Genomic View for GC08P098141 Gene

Genes around GC08P098141 on UCSC Golden Path with GeneCards custom track

GC08P098141 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P098141 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P098141 Gene

ORGUL Member Location for GC08P098141 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P098141 Gene

Proteins for GC08P098141 Gene

Post-translational modifications for GC08P098141 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P098141 Gene

Domains & Families for GC08P098141 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P098141 Gene

Function for GC08P098141 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P098141 Gene

Localization for GC08P098141 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P098141 Gene

Pathways & Interactions for GC08P098141 Gene

SuperPathways for GC08P098141 Gene

No Data Available

Interacting Proteins for GC08P098141 Gene

Gene Ontology (GO) - Biological Process for GC08P098141 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P098141 Gene

Drugs & Compounds for GC08P098141 Gene

No Compound Related Data Available

Transcripts for GC08P098141 Gene

fRNAdb Secondary structures for GC08P098141 Gene

  • FR062947
  • FR335027

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P098141 Gene

No ASD Table

Relevant External Links for GC08P098141 Gene

GeneLoc Exon Structure for
GC08P098141

No data available for mRNA/cDNA for GC08P098141 Gene

Expression for GC08P098141 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P098141 Gene

Orthologs for GC08P098141 Gene

No data available for Orthologs and Evolution for GC08P098141 Gene

Paralogs for GC08P098141 Gene

No data available for Paralogs for GC08P098141 Gene

Variants for GC08P098141 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P098141 Gene

Disorders for GC08P098141 Gene

No disorders were found for GC08P098141 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P098141 Gene

Publications for GC08P098141 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  4. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC08P098141 Gene

Sources for GC08P098141 Gene

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