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Aliases for GC08P073298 Gene

Subcategory (RNA class) for GC08P073298 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC08P073298 Gene

No Aliases found

ORGUL Members for GC08P073298 Gene

No data available for External Ids for GC08P073298 Gene

Summaries for GC08P073298 Gene

GeneCards Summary for GC08P073298 Gene

GC08P073298 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P073298 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P073298

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P073298 Gene

Genomics for GC08P073298 Gene

Regulatory Elements for GC08P073298 Gene

Enhancers for GC08P073298 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G073311 1.5 Ensembl ENCODE dbSUPER 0.4 +13.8 13845 1.9 PKNOX1 ATF1 CREB3L1 ARNT FEZF1 ZNF2 TCF12 ELK1 GATA2 NCOA1 RDH10-AS1 ENSG00000253339 GC08P073298
GH08G073306 1.1 Ensembl ENCODE dbSUPER 0.4 +8.9 8945 2.2 TFDP1 CTCF JUND PRDM6 FOXA2 REST MGA RDH10-AS1 ENSG00000253339 GC08P073298
GH08G073299 0.6 ENCODE 0.7 +1.3 1346 0.4 PRDM6 ATF4 ATF3 CEBPA HLF CEBPB CEBPG PPARG ZBTB20 RDH10-AS1 ENSG00000253339 GC08P073298
GH08G073313 1 ENCODE dbSUPER 0.4 +16.3 16305 1.8 PKNOX1 RFX1 L3MBTL2 NR2F1 BHLHE40 JUNB RAD21 EP300 TFDP1 GATA3 RDH10-AS1 RDH10 ENSG00000253339 GC08P073298
GH08G073305 0.9 ENCODE dbSUPER 0.4 +7.4 7362 0.2 ELF3 CTCF ZNF654 NR4A1 ETV1 TRIM22 REST RAD21 GATA3 SMARCA4 RDH10-AS1 ENSG00000253339 GC08P073298
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P073298 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P073298 Gene

Chromosome:
8
Start:
73,298,339 bp from pter
End:
73,298,437 bp from pter
Size:
99 bases
Orientation:
Plus strand

Genomic View for GC08P073298 Gene

Genes around GC08P073298 on UCSC Golden Path with GeneCards custom track

GC08P073298 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P073298 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P073298 Gene

ORGUL Member Location for GC08P073298 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P073298 Gene

Proteins for GC08P073298 Gene

Post-translational modifications for GC08P073298 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P073298 Gene

Domains & Families for GC08P073298 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P073298 Gene

Function for GC08P073298 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P073298 Gene

Localization for GC08P073298 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08P073298 Gene

Pathways & Interactions for GC08P073298 Gene

SuperPathways for GC08P073298 Gene

No Data Available

Interacting Proteins for GC08P073298 Gene

Gene Ontology (GO) - Biological Process for GC08P073298 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P073298 Gene

Drugs & Compounds for GC08P073298 Gene

No Compound Related Data Available

Transcripts for GC08P073298 Gene

fRNAdb Secondary structures for GC08P073298 Gene

  • FR012601
  • FR088236

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P073298 Gene

No ASD Table

Relevant External Links for GC08P073298 Gene

GeneLoc Exon Structure for
GC08P073298

No data available for mRNA/cDNA for GC08P073298 Gene

Expression for GC08P073298 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P073298 Gene

Orthologs for GC08P073298 Gene

No data available for Orthologs and Evolution for GC08P073298 Gene

Paralogs for GC08P073298 Gene

No data available for Paralogs for GC08P073298 Gene

Variants for GC08P073298 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P073298 Gene

Disorders for GC08P073298 Gene

No disorders were found for GC08P073298 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P073298 Gene

Publications for GC08P073298 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC08P073298 Gene

Sources for GC08P073298 Gene

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