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Aliases for GC08P065965 Gene

Subcategory (RNA class) for GC08P065965 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC08P065965 Gene

No Aliases found

ORGUL Members for GC08P065965 Gene

No data available for External Ids for GC08P065965 Gene

Summaries for GC08P065965 Gene

GeneCards Summary for GC08P065965 Gene

GC08P065965 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P065965 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P065965

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P065965 Gene

Genomics for GC08P065965 Gene

Regulatory Elements for GC08P065965 Gene

Enhancers for GC08P065965 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G065944 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.2 -15192 12.7 PKNOX1 SIN3A FEZF1 ZNF2 ZNF302 ZNF143 FOS DEK SP3 ZHX2 PDE7A MTFR1 DNAJC5B LINC01299 ENSG00000272010 RRS1 GC08P065965 GC08M065874
GH08G065963 1.1 ENCODE dbSUPER 0.7 -0.9 -946 2.2 ZBTB21 INSM2 FEZF1 ZIC2 ZNF664 HIC1 CTBP1 GATA3 ZNF366 ZSCAN5C DNAJC5B RRS1 RRS1-AS1 ADHFE1 MTFR1 PDE7A LINC01299 GC08P065965 GC08M065874
GH08G065972 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.1 8127 2.6 PKNOX1 KLF17 BRCA1 ZNF366 ZSCAN5C SCRT2 RCOR1 FOS JUNB CEBPB DNAJC5B MTFR1 LINC01299 ENSG00000272010 PDE7A GC08P065965 GC08M065983
GH08G065980 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.1 16142 4.1 TBP PKNOX1 TBL1XR1 BMI1 ZNF766 CBX5 SCRT2 ZNF143 ZNF207 RELB PDE7A DNAJC5B MTFR1 LINC01299 GC08M065983 GC08P065965
GH08G065928 1.4 Ensembl ENCODE dbSUPER 0.3 -34.6 -34568 5.2 FOXA2 RAD21 RFX5 RCOR1 MIXL1 ZBTB11 ZNF426 CEBPB PPARG ZNF623 MTFR1 C8orf44 ARMC1 LINC01299 GC08P065965 GC08M065874
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P065965 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P065965 Gene

Chromosome:
8
Start:
65,965,964 bp from pter
End:
65,966,018 bp from pter
Size:
55 bases
Orientation:
Plus strand

Genomic View for GC08P065965 Gene

Genes around GC08P065965 on UCSC Golden Path with GeneCards custom track

GC08P065965 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P065965 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P065965 Gene

ORGUL Member Location for GC08P065965 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P065965 Gene

Proteins for GC08P065965 Gene

Post-translational modifications for GC08P065965 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P065965 Gene

Domains & Families for GC08P065965 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P065965 Gene

Function for GC08P065965 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P065965 Gene

Localization for GC08P065965 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08P065965 Gene

Pathways & Interactions for GC08P065965 Gene

SuperPathways for GC08P065965 Gene

No Data Available

Interacting Proteins for GC08P065965 Gene

Gene Ontology (GO) - Biological Process for GC08P065965 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P065965 Gene

Drugs & Compounds for GC08P065965 Gene

No Compound Related Data Available

Transcripts for GC08P065965 Gene

fRNAdb Secondary structures for GC08P065965 Gene

  • FR196322
  • FR178823

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P065965 Gene

No ASD Table

Relevant External Links for GC08P065965 Gene

GeneLoc Exon Structure for
GC08P065965

No data available for mRNA/cDNA for GC08P065965 Gene

Expression for GC08P065965 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P065965 Gene

Orthologs for GC08P065965 Gene

No data available for Orthologs and Evolution for GC08P065965 Gene

Paralogs for GC08P065965 Gene

No data available for Paralogs for GC08P065965 Gene

Variants for GC08P065965 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P065965 Gene

Disorders for GC08P065965 Gene

No disorders were found for GC08P065965 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P065965 Gene

Publications for GC08P065965 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC08P065965 Gene

Sources for GC08P065965 Gene

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