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Aliases for GC08P002105 Gene

Subcategory (RNA class) for GC08P002105 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC08P002105 Gene

No Aliases found

ORGUL Members for GC08P002105 Gene

No data available for External Ids for GC08P002105 Gene

Summaries for GC08P002105 Gene

GeneCards Summary for GC08P002105 Gene

GC08P002105 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC08P002105 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC08P002105

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P002105 Gene

Genomics for GC08P002105 Gene

Regulatory Elements for GC08P002105 Gene

Enhancers for GC08P002105 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G002101 1 ENCODE dbSUPER 0.7 -2.4 -2440 1.4 ETV1 FEZF1 ZBTB40 ZIC2 FOSL1 ZNF366 SCRT2 FOS NFE2 TCF7L2 GC08P002105 MIR7160
GH08G002126 1.5 Ensembl ENCODE dbSUPER 0.3 +24.8 24773 6.0 FOXA2 ATF1 FEZF1 ZNF2 YY1 GATA2 FOS ZNF263 ZHX2 TSHZ1 MYOM2 GC08P002105 LOC105377781
GH08G002086 1 Ensembl ENCODE 0.4 -17.8 -17769 0.7 CTCF ZNF654 ZBED1 TEAD4 MAX ZNF384 REST RBBP5 ZBTB8A RAD21 MYOM2 MIR7160 GC08P002105
GH08G002089 0.9 ENCODE dbSUPER 0.4 -14.5 -14546 1.0 ETV1 MAX ATF2 GABPA ATF3 ZSCAN16 IRF1 TRIM24 MYC NR2C2 MIR7160 GC08P002105
GH08G002104 0.4 dbSUPER 0.7 +1.1 1134 2.2 ZNF680 GC08P002105 LOC105377781
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08P002105 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08P002105 Gene

Chromosome:
8
Start:
2,104,522 bp from pter
End:
2,104,557 bp from pter
Size:
36 bases
Orientation:
Plus strand

Genomic View for GC08P002105 Gene

Genes around GC08P002105 on UCSC Golden Path with GeneCards custom track

GC08P002105 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P002105 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P002105 Gene

ORGUL Member Location for GC08P002105 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P002105 Gene

Proteins for GC08P002105 Gene

Post-translational modifications for GC08P002105 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P002105 Gene

Domains & Families for GC08P002105 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P002105 Gene

Function for GC08P002105 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P002105 Gene

Localization for GC08P002105 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08P002105 Gene

Pathways & Interactions for GC08P002105 Gene

SuperPathways for GC08P002105 Gene

No Data Available

Interacting Proteins for GC08P002105 Gene

Gene Ontology (GO) - Biological Process for GC08P002105 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P002105 Gene

Drugs & Compounds for GC08P002105 Gene

No Compound Related Data Available

Transcripts for GC08P002105 Gene

fRNAdb Secondary structures for GC08P002105 Gene

  • FR003380
  • FR257287

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P002105 Gene

No ASD Table

Relevant External Links for GC08P002105 Gene

GeneLoc Exon Structure for
GC08P002105

No data available for mRNA/cDNA for GC08P002105 Gene

Expression for GC08P002105 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P002105 Gene

Orthologs for GC08P002105 Gene

No data available for Orthologs and Evolution for GC08P002105 Gene

Paralogs for GC08P002105 Gene

No data available for Paralogs for GC08P002105 Gene

Variants for GC08P002105 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08P002105 Gene

Disorders for GC08P002105 Gene

No disorders were found for GC08P002105 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P002105 Gene

Publications for GC08P002105 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC08P002105 Gene

Sources for GC08P002105 Gene

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