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Aliases for GC08M133645 Gene

Subcategory (RNA class) for GC08M133645 Gene


Quality Score for this RNA gene is


Aliases for GC08M133645 Gene

No Aliases found

ORGUL Members for GC08M133645 Gene

No data available for External Ids for GC08M133645 Gene

Summaries for GC08M133645 Gene

GeneCards Summary for GC08M133645 Gene

GC08M133645 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC08M133645 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

Additional gene information for GC08M133645 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M133645 Gene

Genomics for GC08M133645 Gene

Regulatory Elements for GC08M133645 Gene

Enhancers for GC08M133645 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H133644 1.3 FANTOM5 Ensembl ENCODE 0.7 -0.6 -558 1.9 CTCF PKNOX1 JUN ARID4B MAX SIN3A RAD21 TEAD3 FOSL1 SMC3 ST3GAL1 GC08M133645 ENSG00000212273 GC08M133651
GH08H133651 0.9 FANTOM5 ENCODE 0.4 -7.3 -7317 0.8 EED JUN IKZF1 FOS SPI1 FOXA1 ST3GAL1 ENSG00000212273 GC08M133651 GC08M133645
GH08H133642 0.5 ENCODE 0.7 +2.0 1963 0 JUND CEBPB EP300 TCF7L2 ST3GAL1 GC08M133645 ENSG00000212273 ENSG00000261220
GH08H133653 0.8 Ensembl ENCODE 0.4 -9.7 -9653 0.9 POLR2A EED JUN NR2F1 NR2F2 ENSG00000212273 GC08M133645 GC08M133651
GH08H133579 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +62.9 62850 5.5 CTCF JUN NR2F1 JUNB EBF1 BATF RAD21 ATF2 GATA3 FOS ENSG00000261220 ST3GAL1 GC08M133645 ENSG00000212273
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M133645 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M133645 Gene

Genomic Locations for GC08M133645 Gene
129 bases
Minus strand

Genomic View for GC08M133645 Gene

Genes around GC08M133645 on UCSC Golden Path with GeneCards custom track

GC08M133645 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M133645 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M133645 Gene

Proteins for GC08M133645 Gene

Post-translational modifications for GC08M133645 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M133645 Gene

Domains & Families for GC08M133645 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M133645 Gene

Function for GC08M133645 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M133645 Gene

Localization for GC08M133645 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M133645 Gene

Pathways & Interactions for GC08M133645 Gene

SuperPathways for GC08M133645 Gene

No Data Available

Interacting Proteins for GC08M133645 Gene

Gene Ontology (GO) - Biological Process for GC08M133645 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M133645 Gene

Drugs & Compounds for GC08M133645 Gene

No Compound Related Data Available

Transcripts for GC08M133645 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M133645 Gene

No ASD Table

Relevant External Links for GC08M133645 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M133645 Gene

Expression for GC08M133645 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M133645 Gene

Orthologs for GC08M133645 Gene

No data available for Orthologs and Evolution for GC08M133645 Gene

Paralogs for GC08M133645 Gene

No data available for Paralogs for GC08M133645 Gene

Variants for GC08M133645 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M133645 Gene

Disorders for GC08M133645 Gene

No disorders were found for GC08M133645 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M133645 Gene

Publications for GC08M133645 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 1
  2. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J … Bakin A (Journal of molecular biology 1997) 1

Products for GC08M133645 Gene

Sources for GC08M133645 Gene

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