Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC08M105930 Gene

Subcategory (RNA class) for GC08M105930 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC08M105930 Gene

No Aliases found

ORGUL Members for GC08M105930 Gene

No data available for External Ids for GC08M105930 Gene

Summaries for GC08M105930 Gene

GeneCards Summary for GC08M105930 Gene

GC08M105930 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08M105930 Gene

Genomics for GC08M105930 Gene

Regulatory Elements for GC08M105930 Gene

Enhancers for GC08M105930 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G106010 0.9 Ensembl ENCODE 0.2 -82.4 -82384 1.6 SMARCE1 BHLHE40 MAFG BACH1 DPF2 JUND ZNF316 NFE2L1 NFE2 FOS ZFPM2-AS1 GC08M105930 ENSG00000201627
GH08G105908 0.5 ENCODE 0.3 +20.8 20811 0.1 CTCF ZNF654 RAD21 GC08P105903 GC08M105930 ENSG00000201627
GH08G106044 1.5 FANTOM5 ENCODE dbSUPER 0.1 -117.5 -117470 3.7 PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 GATA2 FOS SP3 TSHZ1 ZNF518A ZFPM2-AS1 GC08M105930 ENSG00000201627
GH08G106058 1.5 Ensembl ENCODE dbSUPER 0.1 -131.0 -130970 3.5 CREB3L1 SIN3A FOS SP3 REST ZNF592 SREBF1 SMARCA4 GLIS1 HMBOX1 ZFPM2-AS1 ENSG00000201627 GC08M105930
GH08G105989 0.6 ENCODE 0.2 -60.7 -60692 1.0 PKNOX1 FEZF1 ZNF384 PRDM6 FOXK2 POU5F1 TRIM28 TCF7L2 GC08M105930 ENSG00000201627 ZFPM2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M105930 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08M105930 Gene

Chromosome:
8
Start:
105,929,127 bp from pter
End:
105,929,238 bp from pter
Size:
112 bases
Orientation:
Minus strand

Genomic View for GC08M105930 Gene

Genes around GC08M105930 on UCSC Golden Path with GeneCards custom track

GC08M105930 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M105930 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M105930 Gene

Proteins for GC08M105930 Gene

Post-translational modifications for GC08M105930 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M105930 Gene

Domains & Families for GC08M105930 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M105930 Gene

Function for GC08M105930 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M105930 Gene

Localization for GC08M105930 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08M105930 Gene

Pathways & Interactions for GC08M105930 Gene

SuperPathways for GC08M105930 Gene

No Data Available

Interacting Proteins for GC08M105930 Gene

Gene Ontology (GO) - Biological Process for GC08M105930 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M105930 Gene

Drugs & Compounds for GC08M105930 Gene

No Compound Related Data Available

Transcripts for GC08M105930 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M105930 Gene

No ASD Table

Relevant External Links for GC08M105930 Gene

GeneLoc Exon Structure for
GC08M105930

No data available for mRNA/cDNA for GC08M105930 Gene

Expression for GC08M105930 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M105930 Gene

Orthologs for GC08M105930 Gene

No data available for Orthologs and Evolution for GC08M105930 Gene

Paralogs for GC08M105930 Gene

No data available for Paralogs for GC08M105930 Gene

Variants for GC08M105930 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M105930 Gene

Disorders for GC08M105930 Gene

No disorders were found for GC08M105930 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M105930 Gene

Publications for GC08M105930 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC08M105930 Gene

Sources for GC08M105930 Gene

Content
Loading form....