Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC08M026683 Gene

Subcategory (RNA class) for GC08M026683 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for GC08M026683 Gene

No Aliases found

ORGUL Members for GC08M026683 Gene

No data available for External Ids for GC08M026683 Gene

Summaries for GC08M026683 Gene

GeneCards Summary for GC08M026683 Gene

GC08M026683 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC08M026683 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC08M026683

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M026683 Gene

Genomics for GC08M026683 Gene

Regulatory Elements for GC08M026683 Gene

Enhancers for GC08M026683 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G026634 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +44.9 44889 9.6 FOXA2 MLX ZFP64 SIN3A ARID4B SLC30A9 FOS KLF13 SP5 REST DPYSL2 PNMA2 GC08M026683 PSME2P5
GH08G026607 2 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +70.9 70946 11.2 HDGF PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 ZNF766 ELK1 GATA2 FOS PNMA2 DPYSL2 SDAD1P1 PPP2R2A BNIP3L PSME2P5 GC08M026683
GH08G026661 1.2 Ensembl ENCODE dbSUPER 0.3 +21.7 21693 0.9 CTCF PKNOX1 SAP130 ZNF48 RAD21 POLR2A ZBTB48 ZNF143 SMC3 RELB DPYSL2 GC08M026683 PSME2P5
GH08G026658 1.2 ENCODE dbSUPER 0.3 +25.0 24998 3.0 PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 KLF7 SP3 SP5 REST MIER3 PNMA2 DPYSL2 GC08M026683 PSME2P5
GH08G026655 1.1 ENCODE dbSUPER 0.3 +28.1 28118 0.3 ATF1 RB1 ZSCAN4 KLF17 ZNF2 RAD21 U2AF2 CREM ZNF654 HCFC1 GC08M026683 PSME2P5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M026683 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08M026683 Gene

Chromosome:
8
Start:
26,683,715 bp from pter
End:
26,683,747 bp from pter
Size:
33 bases
Orientation:
Minus strand

Genomic View for GC08M026683 Gene

Genes around GC08M026683 on UCSC Golden Path with GeneCards custom track

GC08M026683 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M026683 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08M026683 Gene

ORGUL Member Location for GC08M026683 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M026683 Gene

Proteins for GC08M026683 Gene

Post-translational modifications for GC08M026683 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M026683 Gene

Domains & Families for GC08M026683 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M026683 Gene

Function for GC08M026683 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M026683 Gene

Localization for GC08M026683 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08M026683 Gene

Pathways & Interactions for GC08M026683 Gene

SuperPathways for GC08M026683 Gene

No Data Available

Interacting Proteins for GC08M026683 Gene

Gene Ontology (GO) - Biological Process for GC08M026683 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M026683 Gene

Drugs & Compounds for GC08M026683 Gene

No Compound Related Data Available

Transcripts for GC08M026683 Gene

fRNAdb Secondary structures for GC08M026683 Gene

  • FR370295

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M026683 Gene

No ASD Table

Relevant External Links for GC08M026683 Gene

GeneLoc Exon Structure for
GC08M026683

No data available for mRNA/cDNA for GC08M026683 Gene

Expression for GC08M026683 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M026683 Gene

Orthologs for GC08M026683 Gene

No data available for Orthologs and Evolution for GC08M026683 Gene

Paralogs for GC08M026683 Gene

No data available for Paralogs for GC08M026683 Gene

Variants for GC08M026683 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M026683 Gene

Disorders for GC08M026683 Gene

No disorders were found for GC08M026683 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M026683 Gene

Publications for GC08M026683 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC08M026683 Gene

Sources for GC08M026683 Gene

Content
Loading form....