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Aliases for GC08M019610 Gene

Subcategory (RNA class) for GC08M019610 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC08M019610 Gene

No Aliases found

ORGUL Members for GC08M019610 Gene

No data available for External Ids for GC08M019610 Gene

Summaries for GC08M019610 Gene

GeneCards Summary for GC08M019610 Gene

GC08M019610 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC08M019610 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC08M019610

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M019610 Gene

Genomics for GC08M019610 Gene

Regulatory Elements for GC08M019610 Gene

Enhancers for GC08M019610 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G019607 0.9 Ensembl ENCODE 0.7 +2.3 2342 1.8 STAT1 JUN CEBPB FEZF1 EP300 RFX5 JUND STAT3 RCOR1 PRDM10 CSGALNACT1 INTS10 GC08M019610 LOC105379308
GH08G019614 0.7 ENCODE 0.7 -4.4 -4353 1.1 CTCF BACH1 ARID3A FOS ETV6 RELB IKZF2 CREM TRIM22 JUNB GC08M019610 GC08M019656
GH08G019626 1 ENCODE dbSUPER 0.4 -16.6 -16648 1.6 STAT1 TEAD1 TAF1 JUN HLF CEBPB CHD4 EBF1 TBX21 GTF3C2 CSGALNACT1 PSD3 GC08M019610 GC08M019656
GH08G019577 1.3 FANTOM5 Ensembl ENCODE 0.3 +31.6 31561 3.5 GTF2F1 TBP ZNF211 ESRRA FOXA2 TAF1 JUN MAX SIN3A FOSL1 CSGALNACT1 LOC105379308 GC08M019610
GH08G019637 1.3 FANTOM5 Ensembl ENCODE 0.3 -27.8 -27786 1.6 MTA2 CBFB NR2F1 JUNB EBF1 TBX21 EP300 SP1 CBX5 EED CSGALNACT1 GC08M019656 GC08M019610
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M019610 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08M019610 Gene

Chromosome:
8
Start:
19,610,404 bp from pter
End:
19,610,435 bp from pter
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC08M019610 Gene

Genes around GC08M019610 on UCSC Golden Path with GeneCards custom track

GC08M019610 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M019610 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08M019610 Gene

ORGUL Member Location for GC08M019610 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M019610 Gene

Proteins for GC08M019610 Gene

Post-translational modifications for GC08M019610 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M019610 Gene

Domains & Families for GC08M019610 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M019610 Gene

Function for GC08M019610 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M019610 Gene

Localization for GC08M019610 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08M019610 Gene

Pathways & Interactions for GC08M019610 Gene

SuperPathways for GC08M019610 Gene

No Data Available

Interacting Proteins for GC08M019610 Gene

Gene Ontology (GO) - Biological Process for GC08M019610 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M019610 Gene

Drugs & Compounds for GC08M019610 Gene

No Compound Related Data Available

Transcripts for GC08M019610 Gene

fRNAdb Secondary structures for GC08M019610 Gene

  • FR224414

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M019610 Gene

No ASD Table

Relevant External Links for GC08M019610 Gene

GeneLoc Exon Structure for
GC08M019610

No data available for mRNA/cDNA for GC08M019610 Gene

Expression for GC08M019610 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M019610 Gene

Orthologs for GC08M019610 Gene

No data available for Orthologs and Evolution for GC08M019610 Gene

Paralogs for GC08M019610 Gene

No data available for Paralogs for GC08M019610 Gene

Variants for GC08M019610 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M019610 Gene

Disorders for GC08M019610 Gene

No disorders were found for GC08M019610 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M019610 Gene

Publications for GC08M019610 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC08M019610 Gene

Sources for GC08M019610 Gene

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