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Aliases for GC08M011394 Gene

Subcategory (RNA class) for GC08M011394 Gene


Quality Score for this RNA gene is


Aliases for GC08M011394 Gene

No Aliases found

ORGUL Members for GC08M011394 Gene

No data available for External Ids for GC08M011394 Gene

Summaries for GC08M011394 Gene

GeneCards Summary for GC08M011394 Gene

GC08M011394 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC08M011394 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC08M011394 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M011394 Gene

Genomics for GC08M011394 Gene

Regulatory Elements for GC08M011394 Gene

Enhancers for GC08M011394 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H011416 1.3 Ensembl ENCODE dbSUPER 0.3 -25.2 -25221 2.3 HDGF PKNOX1 TBL1XR1 ATF7 ETV6 RUNX3 CREM IKZF2 SMARCA5 CBFB FAM167A BLK LOC105379241 FAM167A-AS1 LOC100129129 TDH ENSG00000255310 ENSG00000255518 ALG1L11P PIR51526
GH08H011411 0.9 ENCODE dbSUPER 0.4 -19.2 -19170 0.2 CTCF ZNF654 TRIM22 REST RAD21 CC2D1A POLR2A ZNF143 SMC3 RCOR1 BLK FAM167A LOC105379241 ENSG00000255354 ENSG00000255518 FAM167A-AS1 PIR51526 GC08M011394 RNU6-1084P
GH08H011409 0.7 ENCODE 0.4 -17.1 -17070 0.2 CTCF ZNF654 RFX1 ETV1 REST ELF1 RAD21 ZNF518A GABPA RFX5 BLK LOC105379241 FAM167A FAM167A-AS1 PIR51526 RNU6-1084P GC08M011394
GH08H011413 0.8 ENCODE 0.3 -21.4 -21350 0.2 CTCF PKNOX1 SIN3A ZNF223 MAX BRCA1 RAD21 RELA EED SMC3 FAM167A BLK LOC105379241 ENSG00000255354 ENSG00000255518 RNU6-1084P FAM167A-AS1 PIR51526 GC08M011394
GH08H011421 0.8 ENCODE 0.3 -29.3 -29278 0.4 HDGF TBL1XR1 MAX BACH1 BMI1 BATF RELA FOXK2 EED ZNF207 FAM167A BLK LOC105379241 RNU6-1084P FAM167A-AS1 ENSG00000255518 LOC649352 PIR51526 GC08M011394
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M011394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M011394 Gene

Genomic Locations for GC08M011394 Gene
108 bases
Minus strand

Genomic View for GC08M011394 Gene

Genes around GC08M011394 on UCSC Golden Path with GeneCards custom track

GC08M011394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M011394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M011394 Gene

Proteins for GC08M011394 Gene

Post-translational modifications for GC08M011394 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M011394 Gene

Domains & Families for GC08M011394 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M011394 Gene

Function for GC08M011394 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M011394 Gene

Localization for GC08M011394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M011394 Gene

Pathways & Interactions for GC08M011394 Gene

SuperPathways for GC08M011394 Gene

No Data Available

Interacting Proteins for GC08M011394 Gene

Gene Ontology (GO) - Biological Process for GC08M011394 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M011394 Gene

Drugs & Compounds for GC08M011394 Gene

No Compound Related Data Available

Transcripts for GC08M011394 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M011394 Gene

No ASD Table

Relevant External Links for GC08M011394 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M011394 Gene

Expression for GC08M011394 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M011394 Gene

Orthologs for GC08M011394 Gene

No data available for Orthologs and Evolution for GC08M011394 Gene

Paralogs for GC08M011394 Gene

No data available for Paralogs for GC08M011394 Gene

Variants for GC08M011394 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M011394 Gene

Disorders for GC08M011394 Gene

No disorders were found for GC08M011394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M011394 Gene

Publications for GC08M011394 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC08M011394 Gene

Sources for GC08M011394 Gene

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