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Aliases for GC08M009858 Gene

Subcategory (RNA class) for GC08M009858 Gene

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Quality Score for this RNA gene is

0.2

Aliases for GC08M009858 Gene

No Aliases found

ORGUL Members for GC08M009858 Gene

No data available for External Ids for GC08M009858 Gene

Summaries for GC08M009858 Gene

GeneCards Summary for GC08M009858 Gene

GC08M009858 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08M009858 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08M009858

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M009858 Gene

Genomics for GC08M009858 Gene

Regulatory Elements for GC08M009858 Gene

Enhancers for GC08M009858 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G009898 1.2 Ensembl ENCODE dbSUPER 0.3 -40.7 -40736 1.9 RING1 NR2F1 CEBPB RBBP5 POLR2A SMARCA4 CEBPA POU5F1 HNF4A NR2F6 RPL10P19 GC08M009903 GC08M009858
GH08G009830 0.8 ENCODE 0.3 +27.2 27190 0.2 CTCF LEF1 CEBPG ZSCAN9 RAD21 RFX5 GATA3 SCRT2 ZNF143 SMC3 MIR597 PIR58717 GC08M009858
GH08G009903 0.8 ENCODE dbSUPER 0.3 -44.0 -44001 0.2 POLR2A SMARCA4 SUZ12 ZBTB33 GC08M009903 GC08M009858
GH08G009829 0.6 ENCODE 0.3 +28.7 28660 0.2 CTCF PKNOX1 ZNF654 TRIM22 SMC3 REST RAD21 MIR597 PIR58717 GC08M009858
GH08G009828 0.5 ENCODE 0.3 +29.6 29600 0.2 KLF1 JUND GLIS1 MIR597 PIR58717 GC08M009858
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M009858 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08M009858 Gene

Chromosome:
8
Start:
9,858,248 bp from pter
End:
9,858,265 bp from pter
Size:
18 bases
Orientation:
Minus strand

Genomic View for GC08M009858 Gene

Genes around GC08M009858 on UCSC Golden Path with GeneCards custom track

GC08M009858 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M009858 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08M009858 Gene

ORGUL Member Location for GC08M009858 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M009858 Gene

Proteins for GC08M009858 Gene

Post-translational modifications for GC08M009858 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M009858 Gene

Domains & Families for GC08M009858 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M009858 Gene

Function for GC08M009858 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M009858 Gene

Localization for GC08M009858 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08M009858 Gene

Pathways & Interactions for GC08M009858 Gene

SuperPathways for GC08M009858 Gene

No Data Available

Interacting Proteins for GC08M009858 Gene

Gene Ontology (GO) - Biological Process for GC08M009858 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M009858 Gene

Drugs & Compounds for GC08M009858 Gene

No Compound Related Data Available

Transcripts for GC08M009858 Gene

fRNAdb Secondary structures for GC08M009858 Gene

  • FR274874

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M009858 Gene

No ASD Table

Relevant External Links for GC08M009858 Gene

GeneLoc Exon Structure for
GC08M009858

No data available for mRNA/cDNA for GC08M009858 Gene

Expression for GC08M009858 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M009858 Gene

Orthologs for GC08M009858 Gene

No data available for Orthologs and Evolution for GC08M009858 Gene

Paralogs for GC08M009858 Gene

No data available for Paralogs for GC08M009858 Gene

Variants for GC08M009858 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M009858 Gene

Disorders for GC08M009858 Gene

No disorders were found for GC08M009858 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M009858 Gene

Publications for GC08M009858 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC08M009858 Gene

Sources for GC08M009858 Gene

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