Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC08M009288 Gene

Subcategory (RNA class) for GC08M009288 Gene


Quality Score for this RNA gene is


Aliases for GC08M009288 Gene

No Aliases found

ORGUL Members for GC08M009288 Gene

No data available for External Ids for GC08M009288 Gene

Summaries for GC08M009288 Gene

GeneCards Summary for GC08M009288 Gene

GC08M009288 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC08M009288 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M009288 Gene

Genomics for GC08M009288 Gene

Regulatory Elements for GC08M009288 Gene

Enhancers for GC08M009288 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G009291 0.7 ENCODE 0.7 -4.3 -4301 0.6 HDAC1 CTCF ZNF202 NR2F1 YY1 FOXA1 JUND GATA2 PBX2 TARDBP ENSG00000253252 MIR597 RNU6-1151P GC08M009288 LOC105379228
GH08G009324 1.1 Ensembl ENCODE 0.3 -37.3 -37267 1.1 BCOR TAF1 ETV1 ZMYM3 MAX CEBPG RAD21 RARA YY1 ADNP PRAG1 LOC105379228 GC08M009288 RNU6-1151P
GH08G009302 0.8 ENCODE 0.4 -15.7 -15712 1.1 ELF3 FOXA2 RAD21 KAT2B YY1 RARA CREM MIXL1 PPARG NR2F2 MIR597 PRAG1 GC08M009288 RNU6-1151P LOC105379228
GH08G009268 0.8 ENCODE dbSUPER 0.4 +18.2 18220 2.3 HDAC2 BCL11A TEAD4 ZNF24 PRAG1 ENSG00000254153 ENSG00000253887 RNU6-1151P GC08M009288
GH08G009263 0.9 ENCODE dbSUPER 0.3 +23.1 23137 2.4 ZNF146 CHD7 ZIC2 JUND HDAC2 BCL11A PBX2 POU5F1 KDM1A ZBTB33 ERI1 ENSG00000253887 GC08M009288 RNU6-1151P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC08M009288 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC08M009288 Gene

9,287,471 bp from pter
9,287,578 bp from pter
108 bases
Minus strand

Genomic View for GC08M009288 Gene

Genes around GC08M009288 on UCSC Golden Path with GeneCards custom track

GC08M009288 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M009288 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M009288 Gene

Proteins for GC08M009288 Gene

Post-translational modifications for GC08M009288 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M009288 Gene

Domains & Families for GC08M009288 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M009288 Gene

Function for GC08M009288 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M009288 Gene

Localization for GC08M009288 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC08M009288 Gene

Pathways & Interactions for GC08M009288 Gene

SuperPathways for GC08M009288 Gene

No Data Available

Interacting Proteins for GC08M009288 Gene

Gene Ontology (GO) - Biological Process for GC08M009288 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M009288 Gene

Drugs & Compounds for GC08M009288 Gene

No Compound Related Data Available

Transcripts for GC08M009288 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M009288 Gene

No ASD Table

Relevant External Links for GC08M009288 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M009288 Gene

Expression for GC08M009288 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M009288 Gene

Orthologs for GC08M009288 Gene

No data available for Orthologs and Evolution for GC08M009288 Gene

Paralogs for GC08M009288 Gene

No data available for Paralogs for GC08M009288 Gene

Variants for GC08M009288 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC08M009288 Gene

Disorders for GC08M009288 Gene

No disorders were found for GC08M009288 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M009288 Gene

Publications for GC08M009288 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC08M009288 Gene

Sources for GC08M009288 Gene

Loading form....