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Aliases for GC07P158470 Gene

Subcategory (RNA class) for GC07P158470 Gene

Y RNA

Quality Score for this RNA gene is

1

Aliases for GC07P158470 Gene

No Aliases found

ORGUL Members for GC07P158470 Gene

No data available for External Ids for GC07P158470 Gene

Summaries for GC07P158470 Gene

GeneCards Summary for GC07P158470 Gene

GC07P158470 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07P158470 Gene

Genomics for GC07P158470 Gene

Regulatory Elements for GC07P158470 Gene

Enhancers for GC07P158470 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G158472 1.2 Ensembl ENCODE dbSUPER 0.7 +2.6 2645 2.3 SCRT1 PKNOX1 RFX1 MXI1 MAZ ZNF687 MXD4 DMAP1 KLF4 ZEB1 MIR595 ENSG00000225365 PTPRN2 ENSG00000272839 GC07P158470 PIR47665
GH07G158431 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -38.1 -38081 2.1 ELF3 TBP PKNOX1 FOXA2 ATF1 ZFP64 ARID4B RARA FOS CREM GC07P158470 GC07M158378
GH07G158467 0.7 ENCODE 0.7 -1.8 -1795 1.9 SCRT1 ZSCAN4 CEBPB CHD7 PRDM2 SSRP1 ZFHX2 ZNF658 ZNF248 FOXP1 MIR595 ENSG00000225365 PTPRN2 GC07P158470 GC07M158378
GH07G158469 0.7 ENCODE 0.7 -0.7 -703 0.2 ZNF473 ZSCAN4 GLI4 CEBPG ZNF23 ZNF239 YY2 ZNF521 CEBPB ZNF843 GC07P158470 GC07M158378
GH07G158494 1.2 Ensembl ENCODE dbSUPER 0.3 +25.4 25430 2.9 ZNF263 SCRT1 CTCF RBBP5 REST EP300 RAD21 NFIC SCRT2 PCBP1 ENSG00000225365 NCAPG2 GC07P158470 PIR47665
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P158470 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P158470 Gene

Chromosome:
7
Start:
158,470,566 bp from pter
End:
158,470,673 bp from pter
Size:
108 bases
Orientation:
Plus strand

Genomic View for GC07P158470 Gene

Genes around GC07P158470 on UCSC Golden Path with GeneCards custom track

GC07P158470 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P158470 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P158470 Gene

Proteins for GC07P158470 Gene

Post-translational modifications for GC07P158470 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P158470 Gene

Domains & Families for GC07P158470 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P158470 Gene

Function for GC07P158470 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P158470 Gene

Localization for GC07P158470 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P158470 Gene

Pathways & Interactions for GC07P158470 Gene

SuperPathways for GC07P158470 Gene

No Data Available

Interacting Proteins for GC07P158470 Gene

Gene Ontology (GO) - Biological Process for GC07P158470 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P158470 Gene

Drugs & Compounds for GC07P158470 Gene

No Compound Related Data Available

Transcripts for GC07P158470 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P158470 Gene

No ASD Table

Relevant External Links for GC07P158470 Gene

GeneLoc Exon Structure for
GC07P158470

No data available for mRNA/cDNA for GC07P158470 Gene

Expression for GC07P158470 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P158470 Gene

Orthologs for GC07P158470 Gene

No data available for Orthologs and Evolution for GC07P158470 Gene

Paralogs for GC07P158470 Gene

No data available for Paralogs for GC07P158470 Gene

Variants for GC07P158470 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P158470 Gene

Disorders for GC07P158470 Gene

No disorders were found for GC07P158470 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P158470 Gene

Publications for GC07P158470 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1

Products for GC07P158470 Gene

Sources for GC07P158470 Gene

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