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Aliases for GC07P148942 Gene

Subcategory (RNA class) for GC07P148942 Gene

Y RNA

Quality Score for this RNA gene is

3

Aliases for GC07P148942 Gene

No Aliases found

ORGUL Members for GC07P148942 Gene

No data available for External Ids for GC07P148942 Gene

Summaries for GC07P148942 Gene

GeneCards Summary for GC07P148942 Gene

GC07P148942 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07P148942 Gene

Genomics for GC07P148942 Gene

Regulatory Elements for GC07P148942 Gene

Enhancers for GC07P148942 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G148940 1.4 Ensembl ENCODE 0.7 -0.1 -87 2.8 FOXA2 PKNOX1 CREB3L1 ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF783 ZNF398 ZNF777 ZNF767P ENSG00000271664 ZNF212 LOC155060 ZNF282 ZNF786 EZH2
GH07G148926 0.8 ENCODE 0.4 -14.1 -14078 1.4 RING1 PKNOX1 ZNF384 FEZF1 ZNF101 ZNF335 ZNF366 POLR2A PRDM10 RELB LOC155060 ZNF767P ZNF783 EZH2 RNU7-20P ZNF862 ZNF777 ZNF786 GC07M148919 GC07P148942
GH07G148930 0.7 ENCODE 0.4 -10.0 -9989 1.6 BCOR ZSCAN4 ZFP64 EGR1 SCRT2 ZBTB20 ZNF263 SCRT1 MTA2 NR2F1 EZH2 RNU7-20P GC07P148942 GC07M148919
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P148942 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P148942 Gene

Chromosome:
7
Start:
148,941,487 bp from pter
End:
148,941,571 bp from pter
Size:
85 bases
Orientation:
Plus strand

Genomic View for GC07P148942 Gene

Genes around GC07P148942 on UCSC Golden Path with GeneCards custom track

GC07P148942 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P148942 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P148942 Gene

ORGUL Member Location for GC07P148942 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P148942 Gene

Proteins for GC07P148942 Gene

Post-translational modifications for GC07P148942 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P148942 Gene

Domains & Families for GC07P148942 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P148942 Gene

Function for GC07P148942 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P148942 Gene

Localization for GC07P148942 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P148942 Gene

Pathways & Interactions for GC07P148942 Gene

SuperPathways for GC07P148942 Gene

No Data Available

Interacting Proteins for GC07P148942 Gene

Gene Ontology (GO) - Biological Process for GC07P148942 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P148942 Gene

Drugs & Compounds for GC07P148942 Gene

No Compound Related Data Available

Transcripts for GC07P148942 Gene

fRNAdb Secondary structures for GC07P148942 Gene

  • FR184129
  • FR157951

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P148942 Gene

No ASD Table

Relevant External Links for GC07P148942 Gene

GeneLoc Exon Structure for
GC07P148942

No data available for mRNA/cDNA for GC07P148942 Gene

Expression for GC07P148942 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P148942 Gene

Orthologs for GC07P148942 Gene

No data available for Orthologs and Evolution for GC07P148942 Gene

Paralogs for GC07P148942 Gene

No data available for Paralogs for GC07P148942 Gene

Variants for GC07P148942 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P148942 Gene

Disorders for GC07P148942 Gene

No disorders were found for GC07P148942 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P148942 Gene

Publications for GC07P148942 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  4. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  5. Genes for murine Y1 and Y3 Ro RNAs have class 3 RNA polymerase III promoter structures and are unlinked on mouse chromosome 6. (PMID: 8863726) Farris A.D. … Harley J.B. (Gene 1996) 1

Products for GC07P148942 Gene

Sources for GC07P148942 Gene

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