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Aliases for GC07P139363 Gene

Subcategory (RNA class) for GC07P139363 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC07P139363 Gene

No Aliases found

ORGUL Members for GC07P139363 Gene

No data available for External Ids for GC07P139363 Gene

Summaries for GC07P139363 Gene

GeneCards Summary for GC07P139363 Gene

GC07P139363 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P139363 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P139363

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P139363 Gene

Genomics for GC07P139363 Gene

Regulatory Elements for GC07P139363 Gene

Enhancers for GC07P139363 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G139357 1.4 ENCODE dbSUPER 0.7 -3.0 -2959 4.3 CREB3L1 AGO1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC MEF2D GLIS1 ENSG00000273391 RNU6-206P GC07P139363
GH07G139362 0.9 ENCODE dbSUPER 0.7 +0.0 17 0.2 WRNIP1 BACH1 SP2 MAFG CEBPG HIC1 ATF3 ZBTB33 RBFOX2 GC07P139363 LOC100129148
GH07G139363 0.8 ENCODE dbSUPER 0.7 -0.6 -645 0.2 GLIS2 ZBTB48 IKZF1 ZNF580 PRDM10 PRDM4 ENSG00000273391 GC07P139363
GH07G139367 0.6 dbSUPER 0.7 +4.6 4628 0.7 ZNF316 MAFG ZFP37 EBF1 NFE2 EMSY ENSG00000273391 FMC1 LUC7L2 GC07P139363 LOC100129148
GH07G139369 0.7 dbSUPER 0.4 +7.3 7295 2.4 PKNOX1 MAFG ATF2 POLR2A ZNF366 ZNF341 IKZF1 PBX2 ZNF600 NFE2 ENSG00000273391 FMC1 LUC7L2 GC07P139363 LOC100129148
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P139363 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P139363 Gene

Chromosome:
7
Start:
139,363,094 bp from pter
End:
139,363,373 bp from pter
Size:
280 bases
Orientation:
Plus strand

Genomic View for GC07P139363 Gene

Genes around GC07P139363 on UCSC Golden Path with GeneCards custom track

GC07P139363 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P139363 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P139363 Gene

ORGUL Member Location for GC07P139363 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P139363 Gene

Proteins for GC07P139363 Gene

Post-translational modifications for GC07P139363 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P139363 Gene

Domains & Families for GC07P139363 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P139363 Gene

Function for GC07P139363 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P139363 Gene

Localization for GC07P139363 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P139363 Gene

Pathways & Interactions for GC07P139363 Gene

SuperPathways for GC07P139363 Gene

No Data Available

Interacting Proteins for GC07P139363 Gene

Gene Ontology (GO) - Biological Process for GC07P139363 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P139363 Gene

Drugs & Compounds for GC07P139363 Gene

No Compound Related Data Available

Transcripts for GC07P139363 Gene

fRNAdb Secondary structures for GC07P139363 Gene

  • FR128055
  • FR309238

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P139363 Gene

No ASD Table

Relevant External Links for GC07P139363 Gene

GeneLoc Exon Structure for
GC07P139363

No data available for mRNA/cDNA for GC07P139363 Gene

Expression for GC07P139363 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P139363 Gene

Orthologs for GC07P139363 Gene

No data available for Orthologs and Evolution for GC07P139363 Gene

Paralogs for GC07P139363 Gene

No data available for Paralogs for GC07P139363 Gene

Variants for GC07P139363 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P139363 Gene

Disorders for GC07P139363 Gene

No disorders were found for GC07P139363 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P139363 Gene

Publications for GC07P139363 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC07P139363 Gene

Sources for GC07P139363 Gene

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