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Aliases for GC07P120049 Gene

Subcategory (RNA class) for GC07P120049 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for GC07P120049 Gene

No Aliases found

ORGUL Members for GC07P120049 Gene

No data available for External Ids for GC07P120049 Gene

Summaries for GC07P120049 Gene

GeneCards Summary for GC07P120049 Gene

GC07P120049 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07P120049 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P120049 Gene

Genomics for GC07P120049 Gene

Regulatory Elements for GC07P120049 Gene

Enhancers for GC07P120049 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G120051 1.1 Ensembl ENCODE 0.7 +4.1 4124 4.8 HDAC1 PKNOX1 CBX3 TCF12 CBX5 FOS CEBPB NCOA1 NFIC SMARCA4 KCND2 GC07P120049 ENSG00000233417
GH07G120064 0.6 ENCODE 0.4 +15.2 15182 1.3 PKNOX1 CBX3 MTA2 ZNF512 IKZF2 TBX21 TRIM28 GC07P120049 ENSG00000233417
GH07G120033 0.4 ENCODE 0.4 -16.2 -16226 0.2 FOXM1 NFYB GC07P120049 RNU1-29P GC07M120007
GH07G120014 0.2 ENCODE 0.3 -34.6 -34566 1.3 CPED1 GC07M120007 RNU1-29P GC07P120049
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P120049 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P120049 Gene

Chromosome:
7
Start:
120,049,497 bp from pter
End:
120,049,581 bp from pter
Size:
85 bases
Orientation:
Plus strand

Genomic View for GC07P120049 Gene

Genes around GC07P120049 on UCSC Golden Path with GeneCards custom track

GC07P120049 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P120049 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P120049 Gene

Proteins for GC07P120049 Gene

Post-translational modifications for GC07P120049 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P120049 Gene

Domains & Families for GC07P120049 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P120049 Gene

Function for GC07P120049 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P120049 Gene

Localization for GC07P120049 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P120049 Gene

Pathways & Interactions for GC07P120049 Gene

SuperPathways for GC07P120049 Gene

No Data Available

Interacting Proteins for GC07P120049 Gene

Gene Ontology (GO) - Biological Process for GC07P120049 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P120049 Gene

Drugs & Compounds for GC07P120049 Gene

No Compound Related Data Available

Transcripts for GC07P120049 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P120049 Gene

No ASD Table

Relevant External Links for GC07P120049 Gene

GeneLoc Exon Structure for
GC07P120049

No data available for mRNA/cDNA for GC07P120049 Gene

Expression for GC07P120049 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P120049 Gene

Orthologs for GC07P120049 Gene

No data available for Orthologs and Evolution for GC07P120049 Gene

Paralogs for GC07P120049 Gene

No data available for Paralogs for GC07P120049 Gene

Variants for GC07P120049 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P120049 Gene

Disorders for GC07P120049 Gene

No disorders were found for GC07P120049 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P120049 Gene

Publications for GC07P120049 Gene

  1. Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions. (PMID: 12007400) Kiss T. (Cell 2002) 1
  2. A computational screen for methylation guide snoRNAs in yeast. (PMID: 10024243) Lowe T.M. … Eddy S.R. (Science 1999) 1

Products for GC07P120049 Gene

Sources for GC07P120049 Gene

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