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Aliases for GC07P099242 Gene

Subcategory (RNA class) for GC07P099242 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07P099242 Gene

No Aliases found

ORGUL Members for GC07P099242 Gene

No data available for External Ids for GC07P099242 Gene

Summaries for GC07P099242 Gene

GeneCards Summary for GC07P099242 Gene

GC07P099242 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC07P099242 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07P099242 Gene

Genomics for GC07P099242 Gene

Regulatory Elements for GC07P099242 Gene

Enhancers for GC07P099242 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H099272 1.2 Ensembl ENCODE 0.3 +31.2 31199 2 ZNF121 ZNF207 FOS ATF7 REST KAT8 SNIP1 SMARCA4 SP7 CTCF ZSCAN25 ZNF655 TRIM4 PTCD1 LOC101927550 ZNF3 TRRAP LOC100419643 ZNF394 AP4M1
GH07H099266 1 Ensembl ENCODE 0.3 +25.2 25244 2 ELF3 SOX13 ZNF792 SAP130 ARID4B EBF1 RAD21 THRB ZSCAN9 RARA SMURF1 GC07P099242 LOC105375421
GH07H099244 0.4 ENCODE 0.7 +2.5 2482 1 ATF2 GC07P099242 LOC105375421
GH07H099312 1 Ensembl ENCODE 0.2 +70.4 70423 0 CTCF FOXA2 RB1 ARID4B MAX EBF1 RAD21 ZNF121 CC2D1A GATA3 SMURF1 LOC105375421 GC07P099242
GH07H099314 0.6 ENCODE 0.2 +72.0 72001 0 CTCF ZFHX2 KLF1 ZNF687 JUNB BATF EGR2 SMURF1 ARPC1B LOC105375421 GC07P099242
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P099242 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P099242 Gene

Chromosome:
7
Start:
99,242,678 bp from pter
End:
99,242,788 bp from pter
Size:
111 bases
Orientation:
Plus strand

Genomic View for GC07P099242 Gene

Genes around GC07P099242 on UCSC Golden Path with GeneCards custom track

GC07P099242 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P099242 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P099242 Gene

ORGUL Member Location for GC07P099242 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P099242 Gene

Proteins for GC07P099242 Gene

Post-translational modifications for GC07P099242 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P099242 Gene

Domains & Families for GC07P099242 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P099242 Gene

Function for GC07P099242 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P099242 Gene

Localization for GC07P099242 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P099242 Gene

Pathways & Interactions for GC07P099242 Gene

SuperPathways for GC07P099242 Gene

No Data Available

Interacting Proteins for GC07P099242 Gene

Gene Ontology (GO) - Biological Process for GC07P099242 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P099242 Gene

Drugs & Compounds for GC07P099242 Gene

No Compound Related Data Available

Transcripts for GC07P099242 Gene

fRNAdb Secondary structures for GC07P099242 Gene

  • FR131203
  • FR206636

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P099242 Gene

No ASD Table

Relevant External Links for GC07P099242 Gene

GeneLoc Exon Structure for
GC07P099242

No data available for mRNA/cDNA for GC07P099242 Gene

Expression for GC07P099242 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P099242 Gene

Orthologs for GC07P099242 Gene

No data available for Orthologs and Evolution for GC07P099242 Gene

Paralogs for GC07P099242 Gene

No data available for Paralogs for GC07P099242 Gene

Variants for GC07P099242 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P099242 Gene

Disorders for GC07P099242 Gene

No disorders were found for GC07P099242 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P099242 Gene

Publications for GC07P099242 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC07P099242 Gene

Sources for GC07P099242 Gene

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