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Aliases for GC07P080641 Gene

Subcategory (RNA class) for GC07P080641 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC07P080641 Gene

No Aliases found

ORGUL Members for GC07P080641 Gene

No data available for External Ids for GC07P080641 Gene

Summaries for GC07P080641 Gene

GeneCards Summary for GC07P080641 Gene

GC07P080641 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC07P080641 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC07P080641 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P080641 Gene

Genomics for GC07P080641 Gene

Regulatory Elements for GC07P080641 Gene

Enhancers for GC07P080641 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H080640 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.8 792 3 ELF3 PKNOX1 FOXA2 RAD21 FOS CREM MIXL1 CEBPB JUNB KAT8 CD36 GC07P080641 ENSG00000229436
GH07H080635 1.2 Ensembl ENCODE dbSUPER 0.7 -4.3 -4338 4 PKNOX1 FOXA2 TBL1XR1 BATF ZNF507 RELA EED ETV6 RUNX3 IKZF2 GC07P080641 GNAT3
GH07H080634 1.4 Ensembl ENCODE dbSUPER 0.4 -7.2 -7205 0 ELF3 PKNOX1 FOXA2 RARA THAP11 USF2 CEBPB REST TGIF2 NFIL3 GC07P080641 GNAT3
GH07H080622 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.2 -19198 0 JUND ZNF680 GC07P080641 GNAT3
GH07H080630 1.2 Ensembl ENCODE dbSUPER 0.4 -10.8 -10798 0 PKNOX1 FOXA2 NFIA CEBPB FEZF1 ZSCAN21 CTBP1 PRDM6 BCL6B ZSCAN5C GC07P080641 GNAT3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P080641 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P080641 Gene

Chromosome:
7
Start:
80,641,810 bp from pter
End:
80,642,978 bp from pter
Size:
1,169 bases
Orientation:
Plus strand

Genomic View for GC07P080641 Gene

Genes around GC07P080641 on UCSC Golden Path with GeneCards custom track

GC07P080641 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P080641 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P080641 Gene

Proteins for GC07P080641 Gene

Post-translational modifications for GC07P080641 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P080641 Gene

Domains & Families for GC07P080641 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P080641 Gene

Function for GC07P080641 Gene

Phenotypes From GWAS Catalog for GC07P080641 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P080641 Gene

Localization for GC07P080641 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P080641 Gene

Pathways & Interactions for GC07P080641 Gene

SuperPathways for GC07P080641 Gene

No Data Available

Interacting Proteins for GC07P080641 Gene

Gene Ontology (GO) - Biological Process for GC07P080641 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P080641 Gene

Drugs & Compounds for GC07P080641 Gene

No Compound Related Data Available

Transcripts for GC07P080641 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P080641 Gene

No ASD Table

Relevant External Links for GC07P080641 Gene

GeneLoc Exon Structure for
GC07P080641

No data available for mRNA/cDNA for GC07P080641 Gene

Expression for GC07P080641 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P080641 Gene

Orthologs for GC07P080641 Gene

No data available for Orthologs and Evolution for GC07P080641 Gene

Paralogs for GC07P080641 Gene

No data available for Paralogs for GC07P080641 Gene

Variants for GC07P080641 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P080641 Gene

Disorders for GC07P080641 Gene

No disorders were found for GC07P080641 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P080641 Gene

Publications for GC07P080641 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and characterization of human non-coding RNAs with tissue-specific expression. (PMID: 17451645) Sasaki YT … Hirose T (Biochemical and biophysical research communications 2007) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC07P080641 Gene

Sources for GC07P080641 Gene

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