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Aliases for GC07P070436 Gene

Subcategory (RNA class) for GC07P070436 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC07P070436 Gene

No Aliases found

ORGUL Members for GC07P070436 Gene

No data available for External Ids for GC07P070436 Gene

Summaries for GC07P070436 Gene

GeneCards Summary for GC07P070436 Gene

GC07P070436 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P070436 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P070436

Additional gene information for GC07P070436 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P070436 Gene

Genomics for GC07P070436 Gene

Regulatory Elements for GC07P070436 Gene

Enhancers for GC07P070436 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H070445 1.7 dbSUPER 0.4 +10.2 10192 2 PKNOX1 L3MBTL2 MNT FEZF1 ZIC2 FOXA1 ZNF664 OSR2 ZFHX2 POLR2A GC07P070436 GC07P070484
GH07H070426 1.5 VISTA 0.4 -10.2 -10209 0 MXI1 POLR2A ATF7 GC07P070436 PIR55157
GH07H070431 0.8 dbSUPER 0.7 -3.6 -3601 2 CTCF PKNOX1 ARNT FEZF1 ZIC2 RAD21 YY1 ZNF121 CTBP1 ZSCAN5C GC07P070436 PIR55157
GH07H070403 1.5 dbSUPER 0.3 -31.0 -30990 4 JUND POLR2A RCOR1 PIR55157 GC07P070436
GH07H070416 0.9 VISTA dbSUPER 0.4 -19.6 -19618 0 MXI1 CBFB EBF1 RAD21 POLR2A IKZF1 EED RUNX3 IKZF2 PIR55157 GC07P070436
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P070436 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P070436 Gene

Chromosome:
7
Start:
70,436,858 bp from pter
End:
70,437,172 bp from pter
Size:
315 bases
Orientation:
Plus strand

Genomic View for GC07P070436 Gene

Genes around GC07P070436 on UCSC Golden Path with GeneCards custom track

GC07P070436 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P070436 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P070436 Gene

ORGUL Member Location for GC07P070436 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P070436 Gene

Proteins for GC07P070436 Gene

Post-translational modifications for GC07P070436 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P070436 Gene

Domains & Families for GC07P070436 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P070436 Gene

Function for GC07P070436 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P070436 Gene

Localization for GC07P070436 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P070436 Gene

Pathways & Interactions for GC07P070436 Gene

SuperPathways for GC07P070436 Gene

No Data Available

Interacting Proteins for GC07P070436 Gene

Gene Ontology (GO) - Biological Process for GC07P070436 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P070436 Gene

Drugs & Compounds for GC07P070436 Gene

No Compound Related Data Available

Transcripts for GC07P070436 Gene

fRNAdb Secondary structures for GC07P070436 Gene

  • FR164158
  • FR065441
  • FR271818

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P070436 Gene

No ASD Table

Relevant External Links for GC07P070436 Gene

GeneLoc Exon Structure for
GC07P070436

No data available for mRNA/cDNA for GC07P070436 Gene

Expression for GC07P070436 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P070436 Gene

Orthologs for GC07P070436 Gene

No data available for Orthologs and Evolution for GC07P070436 Gene

Paralogs for GC07P070436 Gene

No data available for Paralogs for GC07P070436 Gene

Variants for GC07P070436 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P070436 Gene

Disorders for GC07P070436 Gene

No disorders were found for GC07P070436 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P070436 Gene

Publications for GC07P070436 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC07P070436 Gene

Sources for GC07P070436 Gene

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