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Aliases for GC07P054865 Gene

Subcategory (RNA class) for GC07P054865 Gene


Quality Score for this RNA gene is


Aliases for GC07P054865 Gene

No Aliases found

ORGUL Members for GC07P054865 Gene

No data available for External Ids for GC07P054865 Gene

Summaries for GC07P054865 Gene

GeneCards Summary for GC07P054865 Gene

GC07P054865 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07P054865 Gene

  • snoRNA: A snoRNA (small nucleolar RNA) is any one of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P054865 Gene

Genomics for GC07P054865 Gene

Regulatory Elements for GC07P054865 Gene

Enhancers for GC07P054865 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G054836 1.1 Ensembl ENCODE 0.3 -27.5 -27472 3.3 PKNOX1 NFIB SIN3A ZNF48 RAD21 YY1 EGR1 ZNF143 RCOR1 FOS LOC100996654 SEC61G GC07P054865
GH07G054841 1 Ensembl ENCODE 0.3 -23.5 -23549 1.7 SOX13 CTCF PKNOX1 TAF1 MAX ZNF644 RAD21 YY1 SMC3 ZNF143 GC07P054865 SEC61G
GH07G054829 1 Ensembl ENCODE 0.3 -34.2 -34229 3.4 TBP PKNOX1 TAF1 JUN ZSCAN4 MAX RAD21 BRCA1 CTBP1 GATA3 SEC61G LOC100996654 GC07P054865
GH07G054788 1.1 Ensembl ENCODE 0.2 -76.9 -76923 0.7 ATF1 SIN3A BRCA1 RAD21 RFX5 FOS ZNF654 USF2 CEBPB REST SEC61G LOC100996654 GC07P054865
GH07G054809 0.9 Ensembl ENCODE 0.2 -54.5 -54492 2.7 ELF3 CTCF NR2F1 BHLHE40 CEBPB JUNB EP300 RAD21 TEAD3 JUND SEC61G LOC100996654 GC07P054865
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P054865 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P054865 Gene

54,865,814 bp from pter
54,865,901 bp from pter
88 bases
Plus strand

Genomic View for GC07P054865 Gene

Genes around GC07P054865 on UCSC Golden Path with GeneCards custom track

GC07P054865 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P054865 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P054865 Gene

Proteins for GC07P054865 Gene

Post-translational modifications for GC07P054865 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P054865 Gene

Domains & Families for GC07P054865 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P054865 Gene

Function for GC07P054865 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P054865 Gene

Localization for GC07P054865 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P054865 Gene

Pathways & Interactions for GC07P054865 Gene

SuperPathways for GC07P054865 Gene

No Data Available

Interacting Proteins for GC07P054865 Gene

Gene Ontology (GO) - Biological Process for GC07P054865 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P054865 Gene

Drugs & Compounds for GC07P054865 Gene

No Compound Related Data Available

Transcripts for GC07P054865 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P054865 Gene

No ASD Table

Relevant External Links for GC07P054865 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P054865 Gene

Expression for GC07P054865 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P054865 Gene

Orthologs for GC07P054865 Gene

No data available for Orthologs and Evolution for GC07P054865 Gene

Paralogs for GC07P054865 Gene

No data available for Paralogs for GC07P054865 Gene

Variants for GC07P054865 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P054865 Gene

Disorders for GC07P054865 Gene

No disorders were found for GC07P054865 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P054865 Gene

Publications for GC07P054865 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C. … Bachellerie J.P. (J. Mol. Biol. 2000) 1
  3. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin A.G. … Fournier M.J. (Cell 1996) 1

Products for GC07P054865 Gene

Sources for GC07P054865 Gene

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